Study of terpene biosynthetic pathways in medicinal plants based on big data analysis

Abstract Salvia miltiorrhiza is a plant of the genus Sage in the family Labiatae, and the dried roots and rhizomes are important medicinal herbs in traditional Chinese medicine, and triterpenoids are important bioactive substances in the fruits with pharmacological effects. The study utilized transcriptome and triterpenoid metabolite analyses to obtain 21 candidate structural genes that may be related to triterpenoid biosynthesis and 8 transcription factors involved in triterpenoid biosynthesis. During the growth and development of Salvia miltiorrhiza, the content of triterpenes and the expression of structural genes farnesyl pyrophosphate synthase (ZjFPS) and squalene synthase (ZjSQS) were highly correlated, and based on the correlation analysis of the functional genes with the precursors of the salvinor pathway of salvia glycoside synthesis, salvia glycoside element and de-benzoyl salvinorhizaide, 21 CYP450 candidate genes, 13 2DD candidate genes, and 14 UGT candidate genes were identified. We identified 21 CYP450 candidate genes, 13 2ODD candidate genes and 14 UGT candidate genes, and successfully cloned 5 highly expressed UGTs and carried out crude enzyme extraction.

Authors

Institutions

Publication Details

Journal
Applied Mathematics and Nonlinear Sciences
Published
2025-01-01
DOI
https://doi.org/10.2478/amns-2025-1109
Primary Topic
Plant biochemistry and biosynthesis
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Study of terpene biosynthetic pathways in medicinal plants based on big data analysis

Xinyao Su, Zhi Xu, Haiying Sun, Xiaoqian Zhang
Applied Mathematics and Nonlinear Sciences
Plant biochemistry and biosynthesis
article

Study of terpene biosynthetic pathways in medicinal plants based on big data analysis

Xinyao Su, Zhi Xu, Haiying Sun, Xiaoqian Zhang
article en

Abstract

Abstract Salvia miltiorrhiza is a plant of the genus Sage in the family Labiatae, and the dried roots and rhizomes are important medicinal herbs in traditional Chinese medicine, and triterpenoids are important bioactive substances in the fruits with pharmacological effects. The study utilized transcriptome and triterpenoid metabolite analyses to obtain 21 candidate structural genes that may be related to triterpenoid biosynthesis and 8 transcription factors involved in triterpenoid biosynthesis. During the growth and development of Salvia miltiorrhiza, the content of triterpenes and the expression of structural genes farnesyl pyrophosphate synthase (ZjFPS) and squalene synthase (ZjSQS) were highly correlated, and based on the correlation analysis of the functional genes with the precursors of the salvinor pathway of salvia glycoside synthesis, salvia glycoside element and de-benzoyl salvinorhizaide, 21 CYP450 candidate genes, 13 2DD candidate genes, and 14 UGT candidate genes were identified. We identified 21 CYP450 candidate genes, 13 2ODD candidate genes and 14 UGT candidate genes, and successfully cloned 5 highly expressed UGTs and carried out crude enzyme extraction.

Applied Mathematics and Nonlinear SciencesVol. 10(1)
Bozhou People's Hospital (CN)
Openalex Percentile: Top 77%
Plant biochemistry and biosynthesis
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.