Multiphase separation in postsynaptic density regulated by membrane geometry via interaction valency and volume

Biomolecular condensates are found at various cellular locations, nucleus, cytoplasm, and membrane. These condensates often contain multiple components and can separate into multiple phases with various morphologies such as core-shell droplets, implicating functional roles. Demixing and arrangements of condensates are determined by competitive interactions and their locations. Recent studies reported a puzzling multiphase morphology in postsynaptic density components: AMPA receptor, NMDA receptor, PSD-95, and CaMKII. The multiphase morphology appears reversed when transitioning from the solution to the membrane. Using this system as a model, we study the multiphase behavior of condensates in solution (3D) and domain formation on and beneath the membrane (2D) and elucidate molecular mechanisms behind the puzzle. Our simulations reproduce the core-shell structure in 3D in vitro solution, where AMPA-receptor/PSD-95 form the core and NMDA-receptor/CaMKII form the shell, triggered by CaMKII activation. Then, we obtain a reversed morphology on the membrane. This reversal is primarily driven by CaMKII’s high valency and large volume. We find that, in solution, CaMKII’s non-specific volume interaction dominates, while on the membrane, specific multivalent interactions overcome the excluded volume interaction of CaMKII. The layered structures of receptors and CaMKIIs reduce the excluded volume effects of CaMKII on receptors, making the multivalent interaction dominant. These findings highlight the differences between condensate formation in solution and membrane domain formation, modulated by their layered arrangement.

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Publication Details

Journal
eLife
Published
2025-09-23
DOI
https://doi.org/10.7554/elife.106602.3
Primary Topic
RNA Research and Splicing
Type
article
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article

Multiphase separation in postsynaptic density regulated by membrane geometry via interaction valency and volume

Risa Yamada, Giovanni B. Brandani, Shoji Takada
eLife
RNA Research and Splicing
article

Multiphase separation in postsynaptic density regulated by membrane geometry via interaction valency and volume

Risa Yamada, Giovanni B. Brandani, Shoji Takada
article en

Abstract

Biomolecular condensates are found at various cellular locations, nucleus, cytoplasm, and membrane. These condensates often contain multiple components and can separate into multiple phases with various morphologies such as core-shell droplets, implicating functional roles. Demixing and arrangements of condensates are determined by competitive interactions and their locations. Recent studies reported a puzzling multiphase morphology in postsynaptic density components: AMPA receptor, NMDA receptor, PSD-95, and CaMKII. The multiphase morphology appears reversed when transitioning from the solution to the membrane. Using this system as a model, we study the multiphase behavior of condensates in solution (3D) and domain formation on and beneath the membrane (2D) and elucidate molecular mechanisms behind the puzzle. Our simulations reproduce the core-shell structure in 3D in vitro solution, where AMPA-receptor/PSD-95 form the core and NMDA-receptor/CaMKII form the shell, triggered by CaMKII activation. Then, we obtain a reversed morphology on the membrane. This reversal is primarily driven by CaMKII’s high valency and large volume. We find that, in solution, CaMKII’s non-specific volume interaction dominates, while on the membrane, specific multivalent interactions overcome the excluded volume interaction of CaMKII. The layered structures of receptors and CaMKIIs reduce the excluded volume effects of CaMKII on receptors, making the multivalent interaction dominant. These findings highlight the differences between condensate formation in solution and membrane domain formation, modulated by their layered arrangement.

eLifeVol. 14
Kyoto University (JP)
Openalex Percentile: Top 77%
RNA Research and Splicing
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Multiphase separation in postsynaptic density regulated by membrane geometry via interaction valency and volume — Risa Yamada, Giovanni B. Brandani, et al. · eLife (2025) | TGRS Research Map | TGRS