Leveraging unlabeled SEM datasets with self-supervised learning for enhanced particle segmentation
Scanning Electron Microscopes (SEMs) are widely used in experimental science laboratories, often requiring cumbersome and repetitive user analysis. Automating SEM image analysis processes is highly desirable to address this challenge. In particle sample analysis, Machine Learning (ML) has emerged as the most effective approach for particle segmentation. However, the time-intensive process of manually annotating thousands of SEM images limits the applicability of supervised learning approaches. Self-Supervised Learning (SSL) offers a promising alternative by enabling knowledge extraction from raw, unlabeled data. This study presents a framework for evaluating SSL techniques in SEM image analysis, focusing on novel methods leveraging the ConvNeXtV2 architecture for particle detection. A dataset comprising 25,000 SEM images is curated to benchmark these proposed SSL methods. The results demonstrate that ConvNeXtV2 models, with varying parameter counts, consistently outperform other techniques in particle detection across different length scales, achieving up to a 34% reduction in relative error compared to established SSL methods. Furthermore, an ablation study explores the relationship between dataset size and SSL performance, providing actionable insights for practitioners regarding model selection and resource efficiency. This research advances the integration of SSL into autonomous analysis pipelines and supports its application in accelerating materials science discovery.
Authors
- Anubhav Jain (ORCID: https://orcid.org/0000-0001-5893-9967)
- Veit Hagenmeyer (ORCID: https://orcid.org/0000-0002-3572-9083)
- Gerbrand Ceder (ORCID: https://orcid.org/0000-0001-9275-3605)
- Nathan J. Szymanski (ORCID: https://orcid.org/0000-0003-2255-9676)
- Markus Reischl (ORCID: https://orcid.org/0000-0002-7780-6374)
- Luca Rettenberger (ORCID: https://orcid.org/0000-0002-7416-1902)
- Andrea Giunto (ORCID: https://orcid.org/0000-0003-3363-5494)
- Olympia Dartsi
Institutions
- Karlsruhe Institute of Technology (DE)
- Lawrence Berkeley National Laboratory (US)
- University of California, Berkeley (US)
Publication Details
- Journal
- npj Computational Materials
- Published
- 2025-09-22
- DOI
- https://doi.org/10.1038/s41524-025-01802-3
- Citations
- 1
- Primary Topic
- Domain Adaptation and Few-Shot Learning
- Type
- article
- Field-Weighted Citation Impact
- 2.48
Funders
- National Science Foundation
- U.S. Department of Energy
- Center of Excellence for Learning in Education, Science and Technology
- Deutsche Forschungsgemeinschaft
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
- Bundesministerium für Bildung und Forschung
- Basic Energy Sciences