Amidothiazole Derivatives of (+)-Usnic Acid Effectively Inhibit TDP1 and Sensitize Tumor Cells to the Effects of Topotecan

The DNA repair enzyme tyrosyl-DNA phosphodiesterase 1 (TDP1) removes various adducts from the 3'-end of DNA, including those induced by anticancer chemotherapeutics and is therefore considered an important therapeutic target. Previously, we investigated TDP1 inhibitors as sensitizers for the anticancer drug topotecan. Now, we have demonstrated that usnic acid derivatives containing a thiazole ring with an amide linker exhibited inhibitory activity against TDP1 at micromolar and submicromolar concentrations. Moreover, the lead compound OL11-119, (R)-N-(4-(8-acetyl-1,3,7-trihydroxy-2,9a-dimethyl-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-yl)thiazol-2-yl)-4-bromobenzamide, was found to enhance topotecan-induced tumor cell death at a nontoxic concentration. Molecular docking of OL11-119 and its analog with hydrazone linker, OL9-119, a previously identified potent TDP1 inhibitor, was performed. The binding energy of OL9-119 to the enzyme active site was shown to be lower than that of OL11-119, which correlated with the higher inhibitory activity of OL9-119 against TDP1.

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Journal
Molecular Biology
Published
2025-09-22
DOI
https://doi.org/10.1134/s0026893325600758
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
Field-Weighted Citation Impact
0.00

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article

Amidothiazole Derivatives of (+)-Usnic Acid Effectively Inhibit TDP1 and Sensitize Tumor Cells to the Effects of Topotecan

Olga I. Lavrik, Arina A. Chepanova, Nadezhda S. Dyrkheeva, S. A. Zhukov et al.
Molecular Biology
Microbial Natural Products and Biosynthesis
article

Amidothiazole Derivatives of (+)-Usnic Acid Effectively Inhibit TDP1 and Sensitize Tumor Cells to the Effects of Topotecan

Olga I. Lavrik, Arina A. Chepanova, Nadezhda S. Dyrkheeva, S. A. Zhukov, А. В. Цуканов, Aleksandr S. Filimonov, Olga A. Luzina, Maxim S. Kupryushkin, Нариман Ф. Салахутдинов, Irina A. Chernyshova, А. Л. Захаренко
article en

Abstract

The DNA repair enzyme tyrosyl-DNA phosphodiesterase 1 (TDP1) removes various adducts from the 3'-end of DNA, including those induced by anticancer chemotherapeutics and is therefore considered an important therapeutic target. Previously, we investigated TDP1 inhibitors as sensitizers for the anticancer drug topotecan. Now, we have demonstrated that usnic acid derivatives containing a thiazole ring with an amide linker exhibited inhibitory activity against TDP1 at micromolar and submicromolar concentrations. Moreover, the lead compound OL11-119, (R)-N-(4-(8-acetyl-1,3,7-trihydroxy-2,9a-dimethyl-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-yl)thiazol-2-yl)-4-bromobenzamide, was found to enhance topotecan-induced tumor cell death at a nontoxic concentration. Molecular docking of OL11-119 and its analog with hydrazone linker, OL9-119, a previously identified potent TDP1 inhibitor, was performed. The binding energy of OL9-119 to the enzyme active site was shown to be lower than that of OL11-119, which correlated with the higher inhibitory activity of OL9-119 against TDP1.

Molecular BiologyVol. 59(5)
Institute of Chemical Biology and Fundamental Medicine (RU), Novosibirsk Institute of Organic Chemistry (RU), Institute of Cytology and Genetics (RU), Siberian Branch of the Russian Academy of Sciences (RU)
Russian Foundation for Basic Research, Siberian Branch, Russian Academy of Sciences, Russian Academy of Sciences
Openalex Percentile: Top 71%
Microbial Natural Products and Biosynthesis
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