Aurantivibrio plasticivorans gen. nov., sp. nov. and Aurantivibrio infirmus sp. nov., biodegradable plastic-degrading bacteria belonging to the family Cellvibrionaceae, isolated from the coast of Japan

Two Gram-stain-negative, aerobic, non-spore-forming, rod-shaped bacterial strains, designated 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup>, were isolated from biodegradable plastic films immersed in the coastal waters of Japan. These strains showed the ability to degrade biodegradable plastics, poly(butylene succinate-<i>co</i>-adipate) (PBSA) and poly(<i>ε</i>-caprolactone). Phylogenetic analyses based on the 16S rRNA gene sequences revealed that strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> belong to the family <i>Cellvibrionaceae</i> in the order <i>Cellvibrionales</i> and are closely related to members of the genus <i>Gilvimarinus</i>. The species most closely related to strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> were <i>Gilvimarinus agarilyticus</i> M5c<sup>T</sup> and <i>Gilvimarinus polysaccharolyticus</i> YN3<sup>T</sup>, with 16S rRNA gene sequence similarities of 94.4 and 93.3%, respectively. The sequence similarity between the two novel strains was 94.8%, indicating that they represented separate species. The genome length and G+C content of the genome sequence of strain 4NK60-0013<sup>T</sup> were 4,354,061 bp and 46.9 mol%, respectively, whereas those of strain 4NH20-0068<sup>T</sup> were 4,154,637 bp and 43.3 mol%, respectively. The average nucleotide identity values between the strains were <72.0%, similar to the values between the strains and type strains of species from the genera <i>Cellvibrio</i>, <i>Gilvimarinus</i> and <i>Marinimicrobium</i>. Based on phenotypic, cellular fatty acid and phylogenetic characteristics, the two isolates represent novel species within a new genus of the family <i>Cellvibrionaceae</i>, for which the names <i>Aurantivibrio plasticivorans</i> gen. nov., sp. nov. (type species) and <i>Aurantivibrio infirmus</i> sp. nov. have been proposed. Additionally, these strains and other bacteria belonging to the family <i>Cellvibrionaceae</i> have been shown to biodegrade PBSA, a biodegradable plastic. The type strains of <i>A. plasticivorans</i> and <i>A. infirmus</i> are 4NK60-0013<sup>T</sup> (=NBRC 116180<sup>T</sup>=TBRC 19146<sup>T</sup>) and 4NH20-0068<sup>T</sup> (=NBRC 116181<sup>T</sup>=TBRC 19147<sup>T</sup>), respectively.

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2025-09-19
DOI
https://doi.org/10.1099/ijsem.0.006920
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

Aurantivibrio plasticivorans gen. nov., sp. nov. and Aurantivibrio infirmus sp. nov., biodegradable plastic-degrading bacteria belonging to the family Cellvibrionaceae, isolated from the coast of Japan

Kohei Hidaka, Dai‐ichiro Kato, Tokichi Miyakawa, Shun’ichi Ishii et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Aurantivibrio plasticivorans gen. nov., sp. nov. and Aurantivibrio infirmus sp. nov., biodegradable plastic-degrading bacteria belonging to the family Cellvibrionaceae, isolated from the coast of Japan

Kohei Hidaka, Dai‐ichiro Kato, Tokichi Miyakawa, Shun’ichi Ishii, Rieko Kasaishi, Risa Yokoyama, Yoko Furuno, Kazuya Fukuda, Asuka Arimoto, Mamiko Shimamura, Yoshiyuki Ishitani, Kei Kamino, Kunifumi Tagawa, Tatsuya Ueki, Moriyuki Hamada, Takamasa Miura, Yoko Kusuya, Y. Uchino
article en

Abstract

Two Gram-stain-negative, aerobic, non-spore-forming, rod-shaped bacterial strains, designated 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup>, were isolated from biodegradable plastic films immersed in the coastal waters of Japan. These strains showed the ability to degrade biodegradable plastics, poly(butylene succinate-<i>co</i>-adipate) (PBSA) and poly(<i>ε</i>-caprolactone). Phylogenetic analyses based on the 16S rRNA gene sequences revealed that strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> belong to the family <i>Cellvibrionaceae</i> in the order <i>Cellvibrionales</i> and are closely related to members of the genus <i>Gilvimarinus</i>. The species most closely related to strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> were <i>Gilvimarinus agarilyticus</i> M5c<sup>T</sup> and <i>Gilvimarinus polysaccharolyticus</i> YN3<sup>T</sup>, with 16S rRNA gene sequence similarities of 94.4 and 93.3%, respectively. The sequence similarity between the two novel strains was 94.8%, indicating that they represented separate species. The genome length and G+C content of the genome sequence of strain 4NK60-0013<sup>T</sup> were 4,354,061 bp and 46.9 mol%, respectively, whereas those of strain 4NH20-0068<sup>T</sup> were 4,154,637 bp and 43.3 mol%, respectively. The average nucleotide identity values between the strains were <72.0%, similar to the values between the strains and type strains of species from the genera <i>Cellvibrio</i>, <i>Gilvimarinus</i> and <i>Marinimicrobium</i>. Based on phenotypic, cellular fatty acid and phylogenetic characteristics, the two isolates represent novel species within a new genus of the family <i>Cellvibrionaceae</i>, for which the names <i>Aurantivibrio plasticivorans</i> gen. nov., sp. nov. (type species) and <i>Aurantivibrio infirmus</i> sp. nov. have been proposed. Additionally, these strains and other bacteria belonging to the family <i>Cellvibrionaceae</i> have been shown to biodegrade PBSA, a biodegradable plastic. The type strains of <i>A. plasticivorans</i> and <i>A. infirmus</i> are 4NK60-0013<sup>T</sup> (=NBRC 116180<sup>T</sup>=TBRC 19146<sup>T</sup>) and 4NH20-0068<sup>T</sup> (=NBRC 116181<sup>T</sup>=TBRC 19147<sup>T</sup>), respectively.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 75(9)
Kagoshima University (JP), Hiroshima University (JP), Japan Agency for Marine-Earth Science and Technology (JP), National Institute of Technology and Evaluation (JP), Kitasato University (JP)
Openalex Percentile: Top 78%
Genomics and Phylogenetic Studies
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