Peering into the 3D world of rat brain tissue with digital holographic microscopy

Mapping the human brain’s microscopic architecture requires advanced imaging techniques. Conventional microscopy measures transmitted light intensity through thin brain sections, while digital holographic microscopy captures both transmitted amplitude and phase, encoding 3D structural information in a hologram. Despite its promise, applying holography to brain tissue has been hindered by biological complexity. In this study, we integrate in-line holography with bright-field microscopy to capture the first holograms of rat brain tissue to our knowledge. Using Double Side Band (DSB) filtering with a Spatial Light Modulator (SLM), we effectively achieve high-contrast amplitude and phase maps with 2.5μm lateral resolution. By solving the diffraction equation, we reconstruct 3D tissue volumes with submicron axial precision. This method, offering amplitude and phase modalities alongside conventional imaging, holds promise for advancing volumetric brain mapping at microscopic scales.

Authors

Institutions

Publication Details

Published
2025-09-18
DOI
https://doi.org/10.1117/12.3060355
Primary Topic
Digital Holography and Microscopy
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Peering into the 3D world of rat brain tissue with digital holographic microscopy

Katrin Amunts, Markus Axer, Dennis Scheidt, Alejandro Vásquez Arzola et al.
Digital Holography and Microscopy
article

Peering into the 3D world of rat brain tissue with digital holographic microscopy

Katrin Amunts, Markus Axer, Dennis Scheidt, Alejandro Vásquez Arzola, Luisa Capdevila García
article en

Abstract

Mapping the human brain’s microscopic architecture requires advanced imaging techniques. Conventional microscopy measures transmitted light intensity through thin brain sections, while digital holographic microscopy captures both transmitted amplitude and phase, encoding 3D structural information in a hologram. Despite its promise, applying holography to brain tissue has been hindered by biological complexity. In this study, we integrate in-line holography with bright-field microscopy to capture the first holograms of rat brain tissue to our knowledge. Using Double Side Band (DSB) filtering with a Spatial Light Modulator (SLM), we effectively achieve high-contrast amplitude and phase maps with 2.5μm lateral resolution. By solving the diffraction equation, we reconstruct 3D tissue volumes with submicron axial precision. This method, offering amplitude and phase modalities alongside conventional imaging, holds promise for advancing volumetric brain mapping at microscopic scales.

University of Wuppertal (DE), Forschungszentrum Jülich (DE), Heinrich Heine University Düsseldorf (DE), Universidad Nacional Autónoma de México (MX)
Openalex Percentile: Top 80%
Digital Holography and Microscopy
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.