Impact of Gut Microbiota on Drug Metabolism and Absorption

Abstract Purpose of Review Complex interactions between gut microbiota and various drugs can significantly influence drug pharmacokinetics. We examined recent in vitro , ex vivo , and in vivo studies to understand how microbiota directly influences drug metabolism and absorption in order to inform future research and clinical practice. Recent Findings Considerable progress has been made for multiple drug classes using in vitro anaerobic culturing assays and ex vivo systems with human fecal communities, as well as animal models that have provided insights into both direct microbial metabolism of drugs and indirect host-microbiota interactions via regulation of host enzymes or transporters. However, how these effects impact clinical pharmacokinetics remains poorly defined. Summary Future progress will depend on the development of experimental and computational tools to integrate microbiota data into pharmacokinetic modeling and drug development. A mechanistic understanding of microbiota-mediated drug metabolism is critical for improving predictions of drug efficacy, safety, and personalized dosing strategies.

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Publication Details

Journal
Current Pharmacology Reports
Published
2025-09-12
DOI
https://doi.org/10.1007/s40495-025-00429-8
Citations
3
Primary Topic
Gut microbiota and health
Type
article
Field-Weighted Citation Impact
2.42
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article

Impact of Gut Microbiota on Drug Metabolism and Absorption

Kevin Burke, Yanyan Li
3 citations
Current Pharmacology Reports
Gut microbiota and health
2.42
article

Impact of Gut Microbiota on Drug Metabolism and Absorption

Kevin Burke, Yanyan Li
article en
3 citations

Abstract

Abstract Purpose of Review Complex interactions between gut microbiota and various drugs can significantly influence drug pharmacokinetics. We examined recent in vitro , ex vivo , and in vivo studies to understand how microbiota directly influences drug metabolism and absorption in order to inform future research and clinical practice. Recent Findings Considerable progress has been made for multiple drug classes using in vitro anaerobic culturing assays and ex vivo systems with human fecal communities, as well as animal models that have provided insights into both direct microbial metabolism of drugs and indirect host-microbiota interactions via regulation of host enzymes or transporters. However, how these effects impact clinical pharmacokinetics remains poorly defined. Summary Future progress will depend on the development of experimental and computational tools to integrate microbiota data into pharmacokinetic modeling and drug development. A mechanistic understanding of microbiota-mediated drug metabolism is critical for improving predictions of drug efficacy, safety, and personalized dosing strategies.

Current Pharmacology ReportsVol. 11(1)
Binghamton University (US)
Openalex Percentile: Top 10%
Gut microbiota and health
2.42
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