Integrating Single-Cell Transcriptomic Data of Metastatic Gastric Cancer to Construct a Tumor-Associated Neutrophil Signature and Clinical Validation in MSS/pMMR Patients
<b>Background:</b> Single-cell sequencing technology has emerged as a powerful tool for investigating the tumor immune microenvironment, enabling a deeper understanding of the heterogeneity of immune cell populations within tumors. Tumor-associated neutrophils (TANs) have become a focal point in the study of the tumor immune microenvironment due to their involvement in tumorigenesis, progression, and drug resistance. <b>Methods:</b> We analyzed scRNA-seq data from metastatic gastric cancer (GC) and bulk RNA-seq data from multiple GC cohorts. Non-negative matrix factorization (NMF) was used to classify molecular subtypes, and a prognostic model was constructed using LASSO Cox regression. Key genes were validated by using qRT-PCR and immunohistochemistry. Molecular docking was utilized to screen small-molecule compounds targeting prognostic genes. <b>Results:</b> scRNA-seq analysis identified neutrophil-associated clusters. Using neutrophil-related genes, we classified two molecular subtypes with distinct immune microenvironment features and established a six-gene prognostic risk model. Internal and external validation confirmed its robust predictive ability. The model also predicted immunotherapy response, with the low-risk group showing better outcomes, preliminarily validated in MSS/pMMR patients treated with Camrelizumab. Additionally, we assessed chemotherapy and targeted drug sensitivities and identified small-molecule compounds targeting the six prognostic genes. <b>Conclusions:</b> This study highlights the significance of TANs in predicting GC prognosis, immunotherapy response, and drug exploration, providing a foundation for personalized treatment strategies.
Authors
- Mengfang Liu
- Jinhua Xiang (ORCID: https://orcid.org/0000-0002-7052-4972)
- Jing Yu (ORCID: https://orcid.org/0000-0001-9521-261X)
- Changfeng Man (ORCID: https://orcid.org/0000-0003-3369-8882)
- Rong He (ORCID: https://orcid.org/0000-0002-3856-8860)
- Yao Lin (ORCID: https://orcid.org/0000-0001-5301-3081)
- Shan Wang (ORCID: https://orcid.org/0000-0002-0273-8397)
- Yu Fan
- Yimeng Sun (ORCID: https://orcid.org/0000-0003-3557-6133)
Institutions
- Jiangsu University (CN)
- Tongji University (CN)
- Capital University (US)
- Capital Medical University (CN)
- China-Japan Friendship Hospital (CN)
- Cancer Institute (WIA) (IN)
- Affiliated Hospital of Jiangsu University (CN)
- Shanghai Tenth People's Hospital (CN)
- Zhenjiang City Fourth People's Hospital (CN)
- Beijing Friendship Hospital (CN)
Publication Details
- Journal
- ACS Omega
- Published
- 2025-09-16
- DOI
- https://doi.org/10.1021/acsomega.5c06877
- Primary Topic
- Immune cells in cancer
- Type
- article
- Field-Weighted Citation Impact
- 0.00