Comparative analysis of zebrafish fear responses to eight different fish species using 3D locomotion tracking assays

Zebrafish (Danio rerio) are widely used in neurobehavioral research due to their translational relevance in studying fear. Eight different fish species and variations were tested to induce fear responses in zebrafish, including one positive control (convict cichlid, Amatitlania nigrofasciata) and negative control (tiger barb, Puntigrus tetrazona) through a shared-environment test. The observation was done in three dimensions (3D) and two dimensions (2D) to assess the impact of dimensionality on the outcome. A single-camera system was used to capture two viewpoints by mirror reflection installed above the fish tank and reconstructed to 3D using F3LA software. Zebrafish showed a similar behavioral response towards Demason's cichlid (Pseudotrophus demasoni) and threadfin acara (Acarichthys heckelii) as they did to A. nigrofasciata, with some minor differences, and a lesser response to green Gymnocorymbus ternetzi, during the shared-environment tests. Meanwhile, presence of B. melanopterus caused zebrafish to have a higher tendency to freeze and display higher entropy, similar to an anxiety-like response. We found no correlation between behavioral response and the body size of the test fishes. However, a correlation was observed when we tested convict cichlids of different ages. Finally, zebrafish color preference was also observed through the use of G. ternetzi with different body colors as test fish, with the zebrafish preferring orange and red G. ternetzi and mostly avoiding green G. ternetzi. We found use of 3D observation superior to 2D observation because several important endpoints are obtainable only from certain viewpoints.

Authors

Institutions

Publication Details

Journal
Biology Open
Published
2025-09-16
DOI
https://doi.org/10.1242/bio.062110
Primary Topic
Zebrafish Biomedical Research Applications
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Comparative analysis of zebrafish fear responses to eight different fish species using 3D locomotion tracking assays

Chung‐Der Hsiao, Michael Edbert Suryanto, Kevin Adi Kurnia, Tzong-Rong Ger et al.
Biology Open
Zebrafish Biomedical Research Applications
article

Comparative analysis of zebrafish fear responses to eight different fish species using 3D locomotion tracking assays

Chung‐Der Hsiao, Michael Edbert Suryanto, Kevin Adi Kurnia, Tzong-Rong Ger, Gilbert Audira
article en

Abstract

Zebrafish (Danio rerio) are widely used in neurobehavioral research due to their translational relevance in studying fear. Eight different fish species and variations were tested to induce fear responses in zebrafish, including one positive control (convict cichlid, Amatitlania nigrofasciata) and negative control (tiger barb, Puntigrus tetrazona) through a shared-environment test. The observation was done in three dimensions (3D) and two dimensions (2D) to assess the impact of dimensionality on the outcome. A single-camera system was used to capture two viewpoints by mirror reflection installed above the fish tank and reconstructed to 3D using F3LA software. Zebrafish showed a similar behavioral response towards Demason's cichlid (Pseudotrophus demasoni) and threadfin acara (Acarichthys heckelii) as they did to A. nigrofasciata, with some minor differences, and a lesser response to green Gymnocorymbus ternetzi, during the shared-environment tests. Meanwhile, presence of B. melanopterus caused zebrafish to have a higher tendency to freeze and display higher entropy, similar to an anxiety-like response. We found no correlation between behavioral response and the body size of the test fishes. However, a correlation was observed when we tested convict cichlids of different ages. Finally, zebrafish color preference was also observed through the use of G. ternetzi with different body colors as test fish, with the zebrafish preferring orange and red G. ternetzi and mostly avoiding green G. ternetzi. We found use of 3D observation superior to 2D observation because several important endpoints are obtainable only from certain viewpoints.

Biology OpenVol. 14(10)
National Yang Ming Chiao Tung University (TW), Chung Yuan Christian University (TW)
National Science and Technology Council
Openalex Percentile: Top 73%
Zebrafish Biomedical Research Applications
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.