Comparison of denoising methods for dynamic deuterium MRSI at 7T

Motivation: Dynamic deuterium (2H) MRSI is a promising technique for mapping metabolic fluxes. However, achieving adequate spatiotemporal resolution is challenging due to its inherently low SNR. Goal(s): This work compares four low-rank denoising strategies for dynamic 2H-MRSI: Spatiotemporal-based low-rank approximation (ST), global-local higher-order singular value decomposition (GLHOSVD), and Mixed and Stacked ST, which reshape the 5D array into a matrix before denoising. Approach: Each denoising method was tested on simulated and in vivo dynamic 2H-MRSI brain data. Results: All methods reduced noise variation in the metabolite maps. GLHOSVD and Mixed denoising mostly preserved regional physiological variations, whereas ST and Stacked ST substantially degraded them. Impact: Our work helps identify a denoising algorithm for dynamic 2H-MRSI that achieves high denoising performance while preserving regional variations. The achieved reductions in metabolite concentration uncertainty may enable high-resolution, whole-brain dynamic 2H-MRSI, to investigate oxidative and non-oxidative human brain metabolism.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2025-09-16
DOI
https://doi.org/10.58530/2025/2899
Primary Topic
Nuclear Physics and Applications
Type
article
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article

Comparison of denoising methods for dynamic deuterium MRSI at 7T

Martin Krššák, Wolfgang Bogner, Lukas Hingerl, Bernard Lanz et al.
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Nuclear Physics and Applications
article

Comparison of denoising methods for dynamic deuterium MRSI at 7T

Martin Krššák, Wolfgang Bogner, Lukas Hingerl, Bernard Lanz, Fabian Niess, Bernhard Strasser, Cristina Cudalbu, Anna Duguid, Viola Bader, Brayan Alves, S.D. Frese, Aaron Osburg
article en

Abstract

Motivation: Dynamic deuterium (2H) MRSI is a promising technique for mapping metabolic fluxes. However, achieving adequate spatiotemporal resolution is challenging due to its inherently low SNR. Goal(s): This work compares four low-rank denoising strategies for dynamic 2H-MRSI: Spatiotemporal-based low-rank approximation (ST), global-local higher-order singular value decomposition (GLHOSVD), and Mixed and Stacked ST, which reshape the 5D array into a matrix before denoising. Approach: Each denoising method was tested on simulated and in vivo dynamic 2H-MRSI brain data. Results: All methods reduced noise variation in the metabolite maps. GLHOSVD and Mixed denoising mostly preserved regional physiological variations, whereas ST and Stacked ST substantially degraded them. Impact: Our work helps identify a denoising algorithm for dynamic 2H-MRSI that achieves high denoising performance while preserving regional variations. The achieved reductions in metabolite concentration uncertainty may enable high-resolution, whole-brain dynamic 2H-MRSI, to investigate oxidative and non-oxidative human brain metabolism.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Openalex Percentile: Top 68%
Nuclear Physics and Applications
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Comparison of denoising methods for dynamic deuterium MRSI at 7T — Martin Krššák, Wolfgang Bogner, et al. · Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition (2025) | TGRS Research Map | TGRS