Towards reproducible perivascular space quantification: an open-source perivascular space segmentation benchmark
Motivation: The lack of open-source perivascular space (PVS) segmentation code hampers reproducible research, leading to redundant efforts, and hindering broader implementation of PVS segmentation. Goal(s): To create an open-source PVS segmentation benchmark. Approach: Phase 1: We engaged the PVS research community to contribute code to our open-source repository. We are currently collecting, verifying, and containerizing code submissions. Phase 2: We plan to compare submitted code against each other and a manually segmented ground truth benchmark. Our goal is to develop community guidelines based on input data. Results: We have received several code contributions and have issued an open call for more submissions. Impact: The efforts of the PVS repository team will establish an open-source platform for software code related to PVS quantification, minimizing duplicate development, enhancing reproducibility, and providing a benchmark for future development and comparison of segmentation methods.
Authors
- María Jaramillo
- Jacobus F.A. Jansen (ORCID: https://orcid.org/0000-0002-5271-8060)
- José Bernal (ORCID: https://orcid.org/0000-0003-3167-5134)
- Eva M. van Heese (ORCID: https://orcid.org/0000-0002-1954-5014)
- Merel M. van der Thiel (ORCID: https://orcid.org/0000-0001-7190-2157)
- V. Rives Molina
- Britt van den Heuvel
Publication Details
- Journal
- Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
- Published
- 2025-09-16
- DOI
- https://doi.org/10.58530/2025/4733
- Primary Topic
- Cerebrospinal fluid and hydrocephalus
- Type
- article
- Field-Weighted Citation Impact
- 0.00