SeqGPT: Training a Large Language Model to Generate MRI Pulse Sequences

Motivation: LLMs possess remarkable ability to process and generate sequential data which can be used to generate MRI pulse sequences. Goal(s): Train a custom implementation of Generative Pre-trained Transformer (GPT) to generate MRI pulse sequences. Approach: Pseudo random version of sequences like FLASH were generated to create training set which were then tokenized through a custom tokenizer with reduced vocabulary size. These tokenized sequences were used to train a custom implementation of GPT. Results: GPT was able to learn the sequence structure and generate out-of-data pseudo random sequences that can be simulated to get a reconstruction. Impact: This shows the capability of LLMs to generate MRI sequences. Which then can be fine-tuned with a differentiable simulator to adjust the sequence towards desired imaging objectives.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2025-09-16
DOI
https://doi.org/10.58530/2025/3381
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

SeqGPT: Training a Large Language Model to Generate MRI Pulse Sequences

Snawar Hussain, Daniel Hoinkiss, Jörn Huber, Matthias Günther
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Radiomics and Machine Learning in Medical Imaging
article

SeqGPT: Training a Large Language Model to Generate MRI Pulse Sequences

Snawar Hussain, Daniel Hoinkiss, Jörn Huber, Matthias Günther
article en

Abstract

Motivation: LLMs possess remarkable ability to process and generate sequential data which can be used to generate MRI pulse sequences. Goal(s): Train a custom implementation of Generative Pre-trained Transformer (GPT) to generate MRI pulse sequences. Approach: Pseudo random version of sequences like FLASH were generated to create training set which were then tokenized through a custom tokenizer with reduced vocabulary size. These tokenized sequences were used to train a custom implementation of GPT. Results: GPT was able to learn the sequence structure and generate out-of-data pseudo random sequences that can be simulated to get a reconstruction. Impact: This shows the capability of LLMs to generate MRI sequences. Which then can be fine-tuned with a differentiable simulator to adjust the sequence towards desired imaging objectives.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Openalex Percentile: Top 64%
Radiomics and Machine Learning in Medical Imaging
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

SeqGPT: Training a Large Language Model to Generate MRI Pulse Sequences — Snawar Hussain, Daniel Hoinkiss, et al. · Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition (2025) | TGRS Research Map | TGRS