K-space Interpolation using Deep Koopman Autoencoders.

Motivation: Reconstruction of accelerated MRI acquisitions is crucial, particularly for parallel imaging, which is widely used in the clinic. Goal(s): To develop an interpretable neural network for the reconstruction of accelerated MRI data with reduced noise and improved image quality. Approach: A Deep Koopman autoencoder was developed with two non-linear layers for the encoder/decoder and a linear layer for interpolation in the latent space, and compared to GRAPPA and RAKI in two brain scans. Results: The approach results in improved qualitative and quantitative reconstruction results compared to GRAPPA. Compared to RAKI, visual inspection shows improved sharpness, albeit with a slightly higher residual noise. Impact: This work introduces an interpretable neural network for k-space interpolation, enabling good reconstruction quality and offering avenues for extensions to enable autoencoder-based scan-specific denoising.

Authors

Publication Details

Journal
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Published
2025-09-16
DOI
https://doi.org/10.58530/2025/5150
Primary Topic
Model Reduction and Neural Networks
Type
article
Field-Weighted Citation Impact
0.00
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article

K-space Interpolation using Deep Koopman Autoencoders.

Christos Bergeles, Sarah McElroy, Jonathan Shapey, Radhouène Neji et al.
Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Model Reduction and Neural Networks
article

K-space Interpolation using Deep Koopman Autoencoders.

Christos Bergeles, Sarah McElroy, Jonathan Shapey, Radhouène Neji, Sébastien Ourselin, Wassim Ben Salah
article en

Abstract

Motivation: Reconstruction of accelerated MRI acquisitions is crucial, particularly for parallel imaging, which is widely used in the clinic. Goal(s): To develop an interpretable neural network for the reconstruction of accelerated MRI data with reduced noise and improved image quality. Approach: A Deep Koopman autoencoder was developed with two non-linear layers for the encoder/decoder and a linear layer for interpolation in the latent space, and compared to GRAPPA and RAKI in two brain scans. Results: The approach results in improved qualitative and quantitative reconstruction results compared to GRAPPA. Compared to RAKI, visual inspection shows improved sharpness, albeit with a slightly higher residual noise. Impact: This work introduces an interpretable neural network for k-space interpolation, enabling good reconstruction quality and offering avenues for extensions to enable autoencoder-based scan-specific denoising.

Proceedings on CD-ROM - International Society for Magnetic Resonance in Medicine. Scientific Meeting and Exhibition/Proceedings of the International Society for Magnetic Resonance in Medicine, Scientific Meeting and Exhibition
Openalex Percentile: Top 80%
Model Reduction and Neural Networks
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