Detecting Very Weak Signals: A Mixed Strategy to Deal with Biologically Relevant Information

In many biological investigations, the relevant information does not coincide with the most powerful signals (most elevated eigenvalues, dominant frequencies, most populated clusters...), but very often hides in minor features that are difficult to discriminate from random noise. Here we propose an algorithm that, by the combined use of a non-linear cluster analysis procedure and a strategy to discriminate minor signal components from noise, allows singling out biologically relevant hidden information. We tested the algorithm on a sparse data set corresponding to single-cell RNA-Seq measures, being able to identify a very small population of cells in charge of the immune response toward cancer tissue.

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Publication Details

Journal
Algorithms
Published
2025-09-13
DOI
https://doi.org/10.3390/a18090581
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

Detecting Very Weak Signals: A Mixed Strategy to Deal with Biologically Relevant Information

Alessandro Giuliani, Ann Zeuner, Alessandro Vici
Algorithms
Cell Image Analysis Techniques
article

Detecting Very Weak Signals: A Mixed Strategy to Deal with Biologically Relevant Information

Alessandro Giuliani, Ann Zeuner, Alessandro Vici
article en

Abstract

In many biological investigations, the relevant information does not coincide with the most powerful signals (most elevated eigenvalues, dominant frequencies, most populated clusters...), but very often hides in minor features that are difficult to discriminate from random noise. Here we propose an algorithm that, by the combined use of a non-linear cluster analysis procedure and a strategy to discriminate minor signal components from noise, allows singling out biologically relevant hidden information. We tested the algorithm on a sparse data set corresponding to single-cell RNA-Seq measures, being able to identify a very small population of cells in charge of the immune response toward cancer tissue.

AlgorithmsVol. 18(9)
Istituto Superiore di Sanità (IT)
European Commission, Associazione Italiana per la Ricerca sul Cancro
Openalex Percentile: Top 82%
Cell Image Analysis Techniques
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Detecting Very Weak Signals: A Mixed Strategy to Deal with Biologically Relevant Information — Alessandro Giuliani, Ann Zeuner, et al. · Algorithms (2025) | TGRS Research Map | TGRS