A Coral Biomineralization Model for Dual Clumped Isotopes

Abstract Corals exhibit larger and more variable deviations from equilibrium in stable isotope composition (C, O, and ) than most marine biocalcifiers. The disequilibrium isotope effects complicate paleoclimate applications but offer a window into biocalcification processes. Here, we merge a ‐ isotope model in the ‐DIC‐O system (Watkins & Devriendt, 2022, https://doi.org/10.1029/2021gc010200 ) with a coral biomineralization model (Chen et al., 2018, https://doi.org/10.1016/j.gca.2018.02.032 ) and compare its outputs to recent isotopic measurements. The model simultaneously fits the data from multiple coral species but requires a different set of parameters for deep‐sea corals versus tropical corals. We find that: (a) Deviations from dual clumped isotope equilibrium are due primarily to the hydration reaction, the reversibility of which is modulated by the enzyme carbonic anhydrase (CA), the strength of the biological proton pump, and the kinetics of calcification. (b) Optimal data‐model agreement for both C‐O and ‐ is achieved where CA increases the hydration reaction rate by 2,000x for deep‐sea corals and by 1–500x for tropical corals. (c) The ‐ co‐variation slope is sensitive to the cellular flux relative to the seawater DIC flux, with higher cellular and/or lower seawater throughput favoring a shallower slope. (d) For the most part, the modeled compositions of the calcifying fluids (e.g., pH, [], []) are in good agreement with in‐situ measurements. The data‐model agreement constitutes an important step toward a general quantitative biocalcification model applicable to a wide variety of calcifying organisms.

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Publication Details

Journal
Geochemistry Geophysics Geosystems
Published
2025-09-01
DOI
https://doi.org/10.1029/2025gc012263
Primary Topic
Coral and Marine Ecosystems Studies
Type
article
Field-Weighted Citation Impact
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article

A Coral Biomineralization Model for Dual Clumped Isotopes

James M. Watkins, Qicui Jia, Laurent Devriendt, Shuo Zhang et al.
Geochemistry Geophysics Geosystems
Coral and Marine Ecosystems Studies
article

A Coral Biomineralization Model for Dual Clumped Isotopes

James M. Watkins, Qicui Jia, Laurent Devriendt, Shuo Zhang, Sang Chen
article en

Abstract

Abstract Corals exhibit larger and more variable deviations from equilibrium in stable isotope composition (C, O, and ) than most marine biocalcifiers. The disequilibrium isotope effects complicate paleoclimate applications but offer a window into biocalcification processes. Here, we merge a ‐ isotope model in the ‐DIC‐O system (Watkins & Devriendt, 2022, https://doi.org/10.1029/2021gc010200 ) with a coral biomineralization model (Chen et al., 2018, https://doi.org/10.1016/j.gca.2018.02.032 ) and compare its outputs to recent isotopic measurements. The model simultaneously fits the data from multiple coral species but requires a different set of parameters for deep‐sea corals versus tropical corals. We find that: (a) Deviations from dual clumped isotope equilibrium are due primarily to the hydration reaction, the reversibility of which is modulated by the enzyme carbonic anhydrase (CA), the strength of the biological proton pump, and the kinetics of calcification. (b) Optimal data‐model agreement for both C‐O and ‐ is achieved where CA increases the hydration reaction rate by 2,000x for deep‐sea corals and by 1–500x for tropical corals. (c) The ‐ co‐variation slope is sensitive to the cellular flux relative to the seawater DIC flux, with higher cellular and/or lower seawater throughput favoring a shallower slope. (d) For the most part, the modeled compositions of the calcifying fluids (e.g., pH, [], []) are in good agreement with in‐situ measurements. The data‐model agreement constitutes an important step toward a general quantitative biocalcification model applicable to a wide variety of calcifying organisms.

Geochemistry Geophysics GeosystemsVol. 26(9)
Planetary Science Institute (US), Lawrence Berkeley National Laboratory (US), Shanghai Jiao Tong University (CN), Beijing Water Science and Technology Institute (CN), University of California, Davis (US)
Openalex Percentile: Top 76%
Coral and Marine Ecosystems Studies
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