Computational Insights into Metal-Hydride Reactivity in Engineered Metalloenzymes

Transition metal-hydrides are key intermediates in numerous catalytic transformations mediated by molecular complexes and, more recently, in repurposed metalloenzymes. However, their fleeting nature poses significant challenges for experimental characterization, obscuring mechanistic details – particularly in distinguishing between hydrogen atom transfer (HAT) and hydride transfer pathways. Here, we employ a combination of quantum mechanics/molecular mechanics (QM/MM) and molecular dynamics (MD) simulations to investigate the catalytic mechanism of an evolved myoglobin ketoreductase. We model the formation of the iron-hydride (Fe–H) intermediate and the subsequent ketone reduction process. Our results indicate that Fe–H formation occurs via a σ-bond metathesis mechanism, while the ketone reduction proceeds through a stepwise metal-hydride hydrogen atom transfer (MHAT) followed by electron transfer, rather than a concerted hydride transfer as previously proposed. Natural Bond Orbital (NBO) analysis elucidates the electronic features governing MHAT reactivity. We further show that the nature of the axial ligand and applied oriented electric fields modulate the Fe–H bond character and steer the mechanistic preference between MHAT and hydride transfer. These findings provide mechanistic insight into transition metal-hydride reactivity in protein scaffolds and underscore opportunities to tune this reactivity through protein design and electrostatic control.

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Published
2025-09-16
DOI
https://doi.org/10.33774/coe-2025-8lfbd
Primary Topic
Asymmetric Hydrogenation and Catalysis
Type
article
Field-Weighted Citation Impact
0.00

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article

Computational Insights into Metal-Hydride Reactivity in Engineered Metalloenzymes

Ritwika Chatterjee, Garima Jindal
Asymmetric Hydrogenation and Catalysis
article

Computational Insights into Metal-Hydride Reactivity in Engineered Metalloenzymes

Ritwika Chatterjee, Garima Jindal
article en

Abstract

Transition metal-hydrides are key intermediates in numerous catalytic transformations mediated by molecular complexes and, more recently, in repurposed metalloenzymes. However, their fleeting nature poses significant challenges for experimental characterization, obscuring mechanistic details – particularly in distinguishing between hydrogen atom transfer (HAT) and hydride transfer pathways. Here, we employ a combination of quantum mechanics/molecular mechanics (QM/MM) and molecular dynamics (MD) simulations to investigate the catalytic mechanism of an evolved myoglobin ketoreductase. We model the formation of the iron-hydride (Fe–H) intermediate and the subsequent ketone reduction process. Our results indicate that Fe–H formation occurs via a σ-bond metathesis mechanism, while the ketone reduction proceeds through a stepwise metal-hydride hydrogen atom transfer (MHAT) followed by electron transfer, rather than a concerted hydride transfer as previously proposed. Natural Bond Orbital (NBO) analysis elucidates the electronic features governing MHAT reactivity. We further show that the nature of the axial ligand and applied oriented electric fields modulate the Fe–H bond character and steer the mechanistic preference between MHAT and hydride transfer. These findings provide mechanistic insight into transition metal-hydride reactivity in protein scaffolds and underscore opportunities to tune this reactivity through protein design and electrostatic control.

Indian Institute of Science Bangalore (IN)
Ministry of Education, India
Openalex Percentile: Top 80%
Asymmetric Hydrogenation and Catalysis
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Computational Insights into Metal-Hydride Reactivity in Engineered Metalloenzymes — Ritwika Chatterjee, Garima Jindal · (2025) | TGRS Research Map | TGRS