Harmonizing genotype array data to understand genetic risk for brain amyloid burden in the AMYPAD PNHS Consortium

We developed a robust harmonization pipeline for multi-cohort genotype array data. Cerebrospinal fluid amyloid beta (Aβ)-specific polygenic risk scores (PRS) more strongly predicted global Aβ positron emission tomography burden than other PRS. Results suggest a strong genetic predisposition to early Aβ pathology. This work highlights the need for robust data harmonization and data pooling. This work also validates the potential use of PRS as a non-invasive tool to assess Alzheimer's disease risk.

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Publication Details

Journal
Alzheimer s & Dementia
Published
2025-09-01
DOI
https://doi.org/10.1002/alz.70376
Citations
1
Primary Topic
Dementia and Cognitive Impairment Research
Type
article
Field-Weighted Citation Impact
1.47

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article

Harmonizing genotype array data to understand genetic risk for brain amyloid burden in the AMYPAD PNHS Consortium

Emma S. Luckett, David Vállez García, Luigi Lorenzini, Pieter Jelle Visser et al.
1 citations
Alzheimer s & Dementia
Dementia and Cognitive Impairment Research
1.47
article

Harmonizing genotype array data to understand genetic risk for brain amyloid burden in the AMYPAD PNHS Consortium

Emma S. Luckett, David Vállez García, Luigi Lorenzini, Pieter Jelle Visser, Craig Ritchie, Anouk den Braber, Merçé Boada, Yasmina Abakkouy, Frederik Barkhof, Juan Domingo Gispert, Rik R. Vandenberghe, Patricia Genius, Natàlia Vilor‐Tejedor, Isabelle Cleynen, Lyduine E. Collij
article en
1 citations

Abstract

We developed a robust harmonization pipeline for multi-cohort genotype array data. Cerebrospinal fluid amyloid beta (Aβ)-specific polygenic risk scores (PRS) more strongly predicted global Aβ positron emission tomography burden than other PRS. Results suggest a strong genetic predisposition to early Aβ pathology. This work highlights the need for robust data harmonization and data pooling. This work also validates the potential use of PRS as a non-invasive tool to assess Alzheimer's disease risk.

Alzheimer s & DementiaVol. 21(9)
Allen Institute for Brain Science (US), Radboud University Nijmegen (NL), University of St Andrews (GB), Universitat Pompeu Fabra (ES), Lund University (SE), Instituto de Salud Carlos III (ES), Radboud University Medical Center (NL), Karolinska Institutet (SE), Universitat Internacional de Catalunya (ES), Maastricht University (NL), Biomedical Research Networking Center on Neurodegenerative Diseases (ES), Center for Human Genetics (US), Pasqual Maragall Foundation (ES), Amsterdam Neuroscience (NL), Hospital Del Mar (ES), Barcelona Institute of Science and Technology (ES), Municipal Institute for Medical Research (ES), Centre for Genomic Regulation (ES), National Hospital for Neurology and Neurosurgery (GB), Amsterdam University Medical Centers (NL), Hospital del Mar Research Institute (ES), Institute of Neurobiology (BG), University College London (GB), Vrije Universiteit Amsterdam (NL), KU Leuven (BE)
Eli Lilly and Company, Agentschap Innoveren en Ondernemen, European Federation of Pharmaceutical Industries and Associations, National Institute for Health and Care Research, European Commission, Fonds Wetenschappelijk Onderzoek, KU Leuven, University College London Hospitals NHS Foundation Trust, Fundación Bancaria Caixa d'Estalvis i Pensions de Barcelona, Agencia Estatal de Investigación
Openalex Percentile: Top 15%
Dementia and Cognitive Impairment Research
1.47
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