Flashzoi: an enhanced Borzoi for accelerated genomic analysis
The Flashzoi model architecture is part of the MIT-licensed borzoi-pytorch package, can be found at https://github.com/johahi/borzoi-pytorch and installed via pip. Model weights for all four Flashzoi and Borzoi replicates are available at https://huggingface.co/johahi under the MIT license. The code has been archived at https://zenodo.org/records/15669913.
Authors
- Julien Gagneur (ORCID: https://orcid.org/0000-0002-8924-8365)
- Alexander Karollus (ORCID: https://orcid.org/0000-0001-7570-7877)
- Johannes Hingerl (ORCID: https://orcid.org/0000-0002-8260-032X)
Institutions
- Munich School of Philosophy (DE)
- Helmholtz Zentrum München (DE)
- Institute of Human Genetics (PL)
- Munich Center for Machine Learning
- Technical University of Munich (DE)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-09-01
- DOI
- https://doi.org/10.1093/bioinformatics/btaf467
- Citations
- 4
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 3.22
Funders
- European Commission
- Deutsche Forschungsgemeinschaft