Temporal dynamics of SARS-CoV-2 detection in wastewater and population infection trends in Mexico City

Wastewater-based epidemiology (WBE) provides a non-invasive, community-level approach to monitor infectious diseases such as COVID-19. This study investigated the temporal relationship between SARS-CoV-2 RNA levels in wastewater and reported COVID-19 cases in adjacent populations in Mexico City. A total of 40 samples were collected from the Copilco neighborhood during two epidemiological waves (April-September 2021 and November 2021-February 2022). An optimized one-step RT-qPCR protocol targeting the N1 gene achieved 96.7% efficiency with a detection limit of 10 copies/μL. Spatial classification identified three proximity zones based on drainage system topology. Cross-correlation analysis between viral genome copies and confirmed case data revealed a significant temporal lag of 6-8 days. These results support the application of WBE as an early-warning tool to inform public health strategies and anticipate infection trends.

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Publication Details

Journal
Frontiers in Public Health
Published
2025-08-14
DOI
https://doi.org/10.3389/fpubh.2025.1640581
Primary Topic
SARS-CoV-2 detection and testing
Type
article
Field-Weighted Citation Impact
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article

Temporal dynamics of SARS-CoV-2 detection in wastewater and population infection trends in Mexico City

Miguel Atl Silva-Magaña, Enrique Hernández–Lemus, Guillermo de Anda‐Jáuregui, Ana Cecilia Espinosa‐García et al.
Frontiers in Public Health
SARS-CoV-2 detection and testing
article

Temporal dynamics of SARS-CoV-2 detection in wastewater and population infection trends in Mexico City

Miguel Atl Silva-Magaña, Enrique Hernández–Lemus, Guillermo de Anda‐Jáuregui, Ana Cecilia Espinosa‐García, Marisa Mazari-Hiríart, Adalberto Noyola
article en

Abstract

Wastewater-based epidemiology (WBE) provides a non-invasive, community-level approach to monitor infectious diseases such as COVID-19. This study investigated the temporal relationship between SARS-CoV-2 RNA levels in wastewater and reported COVID-19 cases in adjacent populations in Mexico City. A total of 40 samples were collected from the Copilco neighborhood during two epidemiological waves (April-September 2021 and November 2021-February 2022). An optimized one-step RT-qPCR protocol targeting the N1 gene achieved 96.7% efficiency with a detection limit of 10 copies/μL. Spatial classification identified three proximity zones based on drainage system topology. Cross-correlation analysis between viral genome copies and confirmed case data revealed a significant temporal lag of 6-8 days. These results support the application of WBE as an early-warning tool to inform public health strategies and anticipate infection trends.

Frontiers in Public HealthVol. 13
National Institute of Genomic Medicine (MX), Instituto de Ecología (MX), Secretaría de Ciencia, Humanidades, Tecnología e Innovación (MX), Universidad Nacional Autónoma de México (MX)
Universidad Nacional Autónoma de México, Secretaría de Estado de Ciencia, Tecnología e Innovación, Instituto de Ingeniería, Universidad Nacional Autónoma de México
Openalex Percentile: Top 72%
SARS-CoV-2 detection and testing
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