Machine Learning-Driven Localization of Infection Sources in the Human Cardiovascular System

In vivo localization of infection sources is essential for effective diagnosis and targeted disease treatment. In this work, we leverage machine learning models to associate the temporal dynamics of biomarkers detected at static gateway positions with different infection source locations. In particular, we introduce a simulation that models infection sources, the release of biomarkers, and their decay as they flow through the bloodstream. From this, we extract time-series biomarker data with varying decay rates to capture temporal patterns from different infection sources at specific gateway positions. We then train a stacked ensemble model using LightGBM and BernoulliNB to analyze biomarker time-series data for classification. Our results reveal that higher biomarker degradation rates significantly reduce the localization accuracy by limiting the biomarker signal detected at the gateways. A fivefold increase in decay rate lowers the mean cross-validation accuracy from 92to 66. This effect is more pronounced for infection sources located farther from the gateways, e.g., the kidneys. Due to the longer distance, more biomarkers degrade before reaching the wrist-located gateways, leading to a substantial decline in classification performance.

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Publication Details

Journal
IEEE Transactions on Molecular Biological and Multi-Scale Communications
Published
2025-09-03
DOI
https://doi.org/10.1109/tmbmc.2025.3605770
Primary Topic
Machine Learning in Bioinformatics
Type
article
Field-Weighted Citation Impact
0.00

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article

Machine Learning-Driven Localization of Infection Sources in the Human Cardiovascular System

Florian-Lennert Adrian Lau, Regine Wendt, Malte Maria Sieren, Falko Dressler et al.
IEEE Transactions on Molecular Biological and Multi-Scale Communications
Machine Learning in Bioinformatics
article

Machine Learning-Driven Localization of Infection Sources in the Human Cardiovascular System

Florian-Lennert Adrian Lau, Regine Wendt, Malte Maria Sieren, Falko Dressler, Cyrus Khandanpour, Saswati Pal, Jorge Torres Gómez, Lisa Y. Debus, Stefan Fischer
article en

Abstract

In vivo localization of infection sources is essential for effective diagnosis and targeted disease treatment. In this work, we leverage machine learning models to associate the temporal dynamics of biomarkers detected at static gateway positions with different infection source locations. In particular, we introduce a simulation that models infection sources, the release of biomarkers, and their decay as they flow through the bloodstream. From this, we extract time-series biomarker data with varying decay rates to capture temporal patterns from different infection sources at specific gateway positions. We then train a stacked ensemble model using LightGBM and BernoulliNB to analyze biomarker time-series data for classification. Our results reveal that higher biomarker degradation rates significantly reduce the localization accuracy by limiting the biomarker signal detected at the gateways. A fivefold increase in decay rate lowers the mean cross-validation accuracy from 92to 66. This effect is more pronounced for infection sources located farther from the gateways, e.g., the kidneys. Due to the longer distance, more biomarkers degrade before reaching the wrist-located gateways, leading to a substantial decline in classification performance.

IEEE Transactions on Molecular Biological and Multi-Scale CommunicationsVol. 11(4)
University Hospital Schleswig-Holstein (DE), Institute for Telematics (DE), Stiftung Schleswig-Holsteinische Landesmuseen (DE), Technische Universität Berlin (DE), University of Lübeck (DE)
Deutsche Forschungsgemeinschaft
Openalex Percentile: Top 79%
Machine Learning in Bioinformatics
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