Ex-vivo Raman spectroscopy and AI-based classification of soft tissue sarcomas

Soft tissue sarcomas (STS) are a diverse and rare group of malignant tumors arising from the connective tissues of the body, including fibrous tissue, muscles, fat, nerves, and blood vessels. The heterogeneity and infrequency of these tumors pose significant challenges in both diagnosis and treatment. Surgical resection remains the primary treatment strategy, often complemented by radiation or chemotherapy, contingent upon the tumor's size, location, and stage. However, current methods for assessing intraoperative margins are limited, underscoring the need for improved approaches that enhance both efficiency and accuracy. This study investigates the potential of microscopic Raman spectroscopy for distinguishing between different subtypes of soft tissue sarcomas, benign tumors, and normal tissue. Ex-vivo Raman measurements were conducted using a 633 nm excitation wavelength on samples obtained from surgical resections of seven patients (286,672 spectra). After pre-processing of the data, a custom ResNet architecture was developed to accurately classify the different tissue types, achieving an overall weighted accuracy of 97.1% and a clinical alert rate of 1.46%, a critical metric for quantifying the misclassification of malignant tissues. These findings suggest that single Raman spectra could serve as a rapid, non-invasive tool for surgical guidance, aiding in the precise identification of abnormal tissue types and margins.

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Journal
PLoS ONE
Published
2025-09-02
DOI
https://doi.org/10.1371/journal.pone.0330618
Primary Topic
Spectroscopy Techniques in Biomedical and Chemical Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Ex-vivo Raman spectroscopy and AI-based classification of soft tissue sarcomas

Brendan F. Boyce, David Barrera, Imin Kao, R. Farrell et al.
PLoS ONE
Spectroscopy Techniques in Biomedical and Chemical Research
article

Ex-vivo Raman spectroscopy and AI-based classification of soft tissue sarcomas

Brendan F. Boyce, David Barrera, Imin Kao, R. Farrell, Paul Arauz, Elizabeth Lee, Fazel Khan, Maede Boroji, Vahid Danesh
article en

Abstract

Soft tissue sarcomas (STS) are a diverse and rare group of malignant tumors arising from the connective tissues of the body, including fibrous tissue, muscles, fat, nerves, and blood vessels. The heterogeneity and infrequency of these tumors pose significant challenges in both diagnosis and treatment. Surgical resection remains the primary treatment strategy, often complemented by radiation or chemotherapy, contingent upon the tumor's size, location, and stage. However, current methods for assessing intraoperative margins are limited, underscoring the need for improved approaches that enhance both efficiency and accuracy. This study investigates the potential of microscopic Raman spectroscopy for distinguishing between different subtypes of soft tissue sarcomas, benign tumors, and normal tissue. Ex-vivo Raman measurements were conducted using a 633 nm excitation wavelength on samples obtained from surgical resections of seven patients (286,672 spectra). After pre-processing of the data, a custom ResNet architecture was developed to accurately classify the different tissue types, achieving an overall weighted accuracy of 97.1% and a clinical alert rate of 1.46%, a critical metric for quantifying the misclassification of malignant tissues. These findings suggest that single Raman spectra could serve as a rapid, non-invasive tool for surgical guidance, aiding in the precise identification of abnormal tissue types and margins.

PLoS ONEVol. 20(9)
Stony Brook University Hospital (US), Stony Brook University (US)
Stony Brook University
Openalex Percentile: Top 83%
Spectroscopy Techniques in Biomedical and Chemical Research
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