D–MOPH–25: diverse MOF–molecule pairs for Henry’s constants prediction <sup>*</sup>

Abstract Computational methods like grand-canonical Monte Carlo simulations and machine learning (ML) have accelerated metal–organic frameworks (MOF) exploration but are typically limited to a narrow range of adsorbates due to data availability and force field constraints. In this study, we introduce a dataset of diverse MOF–molecule pairs for Henry’s constant prediction, D–MOPH–25, which systematically explores a diverse chemical space by combining 113 molecular adsorbates with over 5000 MOF structures through an active learning process. D–MOPH–25 constitutes the most diverse adsorbate dataset used in any ML study of molecular adsorption in MOFs to date. Our workflow builds a benchmark for predicting Henry’s constants at 300 K, leveraging conformal prediction for uncertainty quantification. Assessment through Shannon entropy and uniform manifold approximation and projection confirms the comprehensiveness of D–MOPH–25 while highlighting the importance of robust classification to filter out unphysical data points in regression tasks. Although future enhancements in model architecture and sampling criteria could improve predictive performance, our dataset already spans the target space using only 2.31% of total possibilities. This comprehensive dataset facilitates assessment of model generalizability across adsorbate species and can establish a foundation for high-throughput MOF screening and ML-driven separation processes.

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Publication Details

Journal
Machine Learning Science and Technology
Published
2025-09-02
DOI
https://doi.org/10.1088/2632-2153/ae0241
Primary Topic
Gas Sensing Nanomaterials and Sensors
Type
article
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article

D–MOPH–25: diverse MOF–molecule pairs for Henry’s constants prediction *

David S. Sholl, Sihoon Choi, Andrew James Medford
Machine Learning Science and Technology
Gas Sensing Nanomaterials and Sensors
article

D–MOPH–25: diverse MOF–molecule pairs for Henry’s constants prediction *

David S. Sholl, Sihoon Choi, Andrew James Medford
article en

Abstract

Abstract Computational methods like grand-canonical Monte Carlo simulations and machine learning (ML) have accelerated metal–organic frameworks (MOF) exploration but are typically limited to a narrow range of adsorbates due to data availability and force field constraints. In this study, we introduce a dataset of diverse MOF–molecule pairs for Henry’s constant prediction, D–MOPH–25, which systematically explores a diverse chemical space by combining 113 molecular adsorbates with over 5000 MOF structures through an active learning process. D–MOPH–25 constitutes the most diverse adsorbate dataset used in any ML study of molecular adsorption in MOFs to date. Our workflow builds a benchmark for predicting Henry’s constants at 300 K, leveraging conformal prediction for uncertainty quantification. Assessment through Shannon entropy and uniform manifold approximation and projection confirms the comprehensiveness of D–MOPH–25 while highlighting the importance of robust classification to filter out unphysical data points in regression tasks. Although future enhancements in model architecture and sampling criteria could improve predictive performance, our dataset already spans the target space using only 2.31% of total possibilities. This comprehensive dataset facilitates assessment of model generalizability across adsorbate species and can establish a foundation for high-throughput MOF screening and ML-driven separation processes.

Machine Learning Science and TechnologyVol. 6(3)
Oak Ridge National Laboratory (US), Georgia Institute of Technology (US)
Openalex Percentile: Top 78%
Gas Sensing Nanomaterials and Sensors
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D–MOPH–25: diverse MOF–molecule pairs for Henry’s constants prediction <sup>*</sup> — David S. Sholl, Sihoon Choi, et al. · Machine Learning Science and Technology (2025) | TGRS Research Map | TGRS