Genome report: first whole genome assembly of <i>Python regius</i> (ball python), a model of extreme physiological and metabolic plasticity

The study of nontraditional model organisms, particularly those exhibiting extreme phenotypes, offers unique insights into adaptive mechanisms of stress response and survival. Snakes, with their remarkable physiological, metabolic, and morphological adaptations, serve as powerful models for investigating these processes. Burmese pythons (Python bivittatus) have been used as a model for studying the plasticity of extreme physiological systems. The low contiguity of the P. bivittatus genome and rising challenges in obtaining Burmese pythons for study prompted us to sequence, assemble, and annotate the genome of the closely related ball python (Python regius). Using a hybrid sequencing approach, we generated a 1.45-Gb genome assembly with a scaffold N50 greater than 61 Mb and a benchmarking universal single-copy ortholog (BUSCO) score of 98%, representing one of the highest quality genomes to date for a member of the Pythonidae family. This assembly provides a valuable resource for studying snake-specific traits and evolutionary biology. Furthermore, it enables exploration of the molecular mechanisms underlying the remarkable cardiac and muscular adaptations in pythons, such as their ability to rapidly remodel their heart following feeding and resist muscular atrophy during prolonged fasting. These insights have potential applications in human health, particularly in the development of therapies targeting cardiac hypertrophy and muscular atrophy.

Authors

Institutions

Publication Details

Journal
G3 Genes Genomes Genetics
Published
2025-09-02
DOI
https://doi.org/10.1093/g3journal/jkaf197
Citations
1
Primary Topic
Physiological and biochemical adaptations
Type
article
Field-Weighted Citation Impact
1.72

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Genome report: first whole genome assembly of Python regius (ball python), a model of extreme physiological and metabolic plasticity

Edward B. Chuong, Holly Allen, Dakota R. Hunt, Leslie Anne Leinwand et al.
1 citations
G3 Genes Genomes Genetics
Physiological and biochemical adaptations
1.72
article

Genome report: first whole genome assembly of Python regius (ball python), a model of extreme physiological and metabolic plasticity

Edward B. Chuong, Holly Allen, Dakota R. Hunt, Leslie Anne Leinwand, Thomas G. Martin, Sophia N. Feghali
article en
1 citations

Abstract

The study of nontraditional model organisms, particularly those exhibiting extreme phenotypes, offers unique insights into adaptive mechanisms of stress response and survival. Snakes, with their remarkable physiological, metabolic, and morphological adaptations, serve as powerful models for investigating these processes. Burmese pythons (Python bivittatus) have been used as a model for studying the plasticity of extreme physiological systems. The low contiguity of the P. bivittatus genome and rising challenges in obtaining Burmese pythons for study prompted us to sequence, assemble, and annotate the genome of the closely related ball python (Python regius). Using a hybrid sequencing approach, we generated a 1.45-Gb genome assembly with a scaffold N50 greater than 61 Mb and a benchmarking universal single-copy ortholog (BUSCO) score of 98%, representing one of the highest quality genomes to date for a member of the Pythonidae family. This assembly provides a valuable resource for studying snake-specific traits and evolutionary biology. Furthermore, it enables exploration of the molecular mechanisms underlying the remarkable cardiac and muscular adaptations in pythons, such as their ability to rapidly remodel their heart following feeding and resist muscular atrophy during prolonged fasting. These insights have potential applications in human health, particularly in the development of therapies targeting cardiac hypertrophy and muscular atrophy.

G3 Genes Genomes GeneticsVol. 15(11)
University of Colorado Boulder (US)
American Heart Association, National Institutes of Health, University of Colorado Boulder
Openalex Percentile: Top 14%
Physiological and biochemical adaptations
1.72
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.