A Targeted BLAST-CAP3 Workflow for Fast Mitochondrial Gene Assembly from Public Transcriptomes: Acheta domesticus as a Model

Rapid access to mitochondrial marker genes is essential for species identification and phylogenetics, but conventional barcoding or genome skimming remains time-consuming and resource-intensive. Public RNA-Seq archives, an underused source of mitochon

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Published
2025-09-02
DOI
https://doi.org/10.22541/au.175680012.29943479/v1
Primary Topic
Species Distribution and Climate Change
Type
article
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article

A Targeted BLAST-CAP3 Workflow for Fast Mitochondrial Gene Assembly from Public Transcriptomes: Acheta domesticus as a Model

Yash Gupta
Species Distribution and Climate Change
article

A Targeted BLAST-CAP3 Workflow for Fast Mitochondrial Gene Assembly from Public Transcriptomes: Acheta domesticus as a Model

Yash Gupta
article en

Abstract

Rapid access to mitochondrial marker genes is essential for species identification and phylogenetics, but conventional barcoding or genome skimming remains time-consuming and resource-intensive. Public RNA-Seq archives, an underused source of mitochon

Naresuan University Hospital (TH)
Naresuan University
Openalex Percentile: Top 87%
Species Distribution and Climate Change
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A Targeted BLAST-CAP3 Workflow for Fast Mitochondrial Gene Assembly from Public Transcriptomes: Acheta domesticus as a Model — Yash Gupta · (2025) | TGRS Research Map | TGRS