Coral anthozoan-specific opsins employ a novel chloride counterion for spectral tuning
Animal opsins are G protein-coupled receptors that have evolved to sense light by covalently binding a retinal chromophore via a protonated (positively charged) Schiff base. A negatively charged amino acid in the opsin, acting as a counterion, stabilizes the proton on the Schiff base, which is essential for sensitivity to visible light. In this study, we investigate the spectroscopic properties of a unique class of opsins from a reef-building coral belonging to the anthozoan-specific opsin II group (ASO-II opsins), which intriguingly lack a counterion residue at any of established sites. Our findings reveal that, unlike other known animal opsins, the protonated state of the Schiff base in visible light-sensitive ASO-II opsins is highly dependent on exogenously supplied chloride ions (Cl − ). By using structural modeling and quantum mechanics/molecular mechanics (QM/MM) calculations to interpret spectroscopy data, we conclude that, in the dark state, ASO-II opsins employ environmental Cl − as their native counterion, while a nearby polar residue, Glu292 in its protonated neutral form, facilitates Cl − binding. In contrast, Glu292 plays a crucial role in maintaining the protonation state of the Schiff base in the light-activated protein, serving as the counterion in the photoproduct. Furthermore, Glu292 is involved in G protein activation of the ASO-II opsin, suggesting that this novel counterion system coordinates multiple functional properties.
Authors
- Mitsumasa Koyanagi (ORCID: https://orcid.org/0000-0002-7741-918X)
- Makoto Iwasaki (ORCID: https://orcid.org/0000-0002-9022-5304)
- Saumik Sen (ORCID: https://orcid.org/0000-0002-7490-0517)
- Akihisa Terakita (ORCID: https://orcid.org/0000-0002-8379-8913)
- Tomohiro Sugihara
- Xavier Deupí (ORCID: https://orcid.org/0000-0003-4572-9316)
- Gebhard F. X. Schertler (ORCID: https://orcid.org/0000-0002-5846-6810)
- Yusuke Sakai (ORCID: https://orcid.org/0000-0002-7092-0094)
- Yukiya Kakeyama
Institutions
- SIB Swiss Institute of Bioinformatics (CH)
- Osaka City University (JP)
- Computational Physics (United States) (US)
- Center for Life Sciences (CN)
Publication Details
- Journal
- eLife
- Published
- 2025-09-01
- DOI
- https://doi.org/10.7554/elife.105451.3
- Citations
- 1
- Primary Topic
- Photoreceptor and optogenetics research
- Type
- article
- Field-Weighted Citation Impact
- 0.91
Funders
- Ministry of Education, Culture, Sports, Science and Technology
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
- Horizon 2020 Framework Programme
- Japan Science and Technology Agency