A core needle biopsy combined with novel spectroscopic probe for in vivo tissue classification – A pilot study on piglets

Tissue sampling is a primary goal of core needle biopsies (CNB), cancer therapy evaluation, and autoimmune disease assessment. Conventional guidance methods such as ultrasound and MRI suffer from periprocedural tissue‐type insensitivity in complex biopsy targets, motion sensitivity, imaging artifacts and high costs, which may limit their usefulness. Accurate tissue classification and needle guidance during CNB are equally important. Mistakes may lead to sample inadequacies, obscured results, incorrect sampling spots, and ultimately repeated biopsies. To address these challenges, this study investigates the feasibility of a smart CNB probe integrating real-time optical spectroscopy for enhanced tissue characterization during in vivo biopsy utilizing machine learning methods. Ten fabricated probes were tested in vivo on porcine fat, liver, and kidney tissues, demonstrating potential for improving biopsy accuracy. Acquired spectral data enabled effective tissue differentiation, as indicated by the best-performing classification models. LDA classifier with MRMR feature selection reached sensitivity of 87.3 % in classification between liver and fat tissues, where SVM with linear kernel and PCA reached 86.4 % sensitivity in kidney vs fat. These findings suggest that integrating optical spectroscopy into CNB procedures may enhance diagnostic accuracy while mitigating procedural risks.

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Publication Details

Journal
Biomedical Engineering Advances
Published
2025-09-02
DOI
https://doi.org/10.1016/j.bea.2025.100191
Primary Topic
Spectroscopy Techniques in Biomedical and Chemical Research
Type
article
Field-Weighted Citation Impact
0.00

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article

A core needle biopsy combined with novel spectroscopic probe for in vivo tissue classification – A pilot study on piglets

Teemu Myllylä, Heikki J. Nieminen, Martti Ilvesmäki, Markus J. Mäkinen et al.
Biomedical Engineering Advances
Spectroscopy Techniques in Biomedical and Chemical Research
article

A core needle biopsy combined with novel spectroscopic probe for in vivo tissue classification – A pilot study on piglets

Teemu Myllylä, Heikki J. Nieminen, Martti Ilvesmäki, Markus J. Mäkinen, Jyri Järvinen, Miika T. Nieminen, Łukasz Surażyński
article en

Abstract

Tissue sampling is a primary goal of core needle biopsies (CNB), cancer therapy evaluation, and autoimmune disease assessment. Conventional guidance methods such as ultrasound and MRI suffer from periprocedural tissue‐type insensitivity in complex biopsy targets, motion sensitivity, imaging artifacts and high costs, which may limit their usefulness. Accurate tissue classification and needle guidance during CNB are equally important. Mistakes may lead to sample inadequacies, obscured results, incorrect sampling spots, and ultimately repeated biopsies. To address these challenges, this study investigates the feasibility of a smart CNB probe integrating real-time optical spectroscopy for enhanced tissue characterization during in vivo biopsy utilizing machine learning methods. Ten fabricated probes were tested in vivo on porcine fat, liver, and kidney tissues, demonstrating potential for improving biopsy accuracy. Acquired spectral data enabled effective tissue differentiation, as indicated by the best-performing classification models. LDA classifier with MRMR feature selection reached sensitivity of 87.3 % in classification between liver and fat tissues, where SVM with linear kernel and PCA reached 86.4 % sensitivity in kidney vs fat. These findings suggest that integrating optical spectroscopy into CNB procedures may enhance diagnostic accuracy while mitigating procedural risks.

Biomedical Engineering AdvancesVol. 10
Oulu University Hospital (FI), University of Oulu (FI), Aalto University (FI)
Business Finland
Openalex Percentile: Top 84%
Spectroscopy Techniques in Biomedical and Chemical Research
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