Clinical Utility of a Targeted Next-Generation Sequencing Panel for Inherited Platelet Disorders in Children

<b>Background/Objectives</b>: Inherited platelet disorders (IPDs) are diverse conditions characterized by abnormalities in platelet count and function. Next-Generation Sequencing (NGS) shows promise as a diagnostic tool in the diagnosis of IPDs. This study aims to assess the clinical value and limitations of using a targeted NGS panel in diagnosing children with suspected IPDs. <b>Methods</b>: We conducted a retrospective study of 93 children evaluated for suspected IPDs. A targeted NGS panel of 14 IPD-associated genes (<i>RUNX1</i>, <i>WAS</i>, <i>ADAMTS13</i>, <i>ANKRD26</i>, <i>CYCS</i>, <i>GATA1</i>, <i>GP1BA</i>, <i>GB1BB</i>, <i>GP9</i>, <i>ITGA2B</i>, <i>ITGB3</i>, <i>MASTL</i>, <i>MPL</i>, <i>MYH9</i>) was performed. <b>Results</b>: Genetic variants were identified in 30 patients (32.3% of the cohort). A total of 37 variants, of which 15 (40.5%) were novel, were found across 11 of the 14 genes on the panel (all except <i>MPL</i>, <i>CYCS</i>, and <i>RUNX1</i>). Variants were most frequently found in <i>ITGB3</i> (18.9% of variants), <i>GP1BA</i> (16.2%), and <i>ADAMTS13</i> (16.2%) genes. The majority of variants (64.9%) were classified as variants of uncertain significance (VUS), followed by likely pathogenic (LP) (27%) and pathogenic (8.1%) variants. Most variants were in a heterozygous state (73%). Specific cases highlighted complex genetic scenarios, such as co-occurring variants, and the identification of pathogenic and LP variants in patients initially presenting with immune thrombocytopenia. <b>Conclusions</b>: NGS helps to identify genetic causes, assess risk, manage, and provide genetic counseling in the management of IPDs. However, the prevalence of VUS underscores the need for a multidisciplinary approach to evaluate NGS results accurately.

Authors

Institutions

Publication Details

Journal
Diagnostics
Published
2025-08-30
DOI
https://doi.org/10.3390/diagnostics15172210
Primary Topic
Platelet Disorders and Treatments
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Clinical Utility of a Targeted Next-Generation Sequencing Panel for Inherited Platelet Disorders in Children

Dilek Kaçar, Özlem Arman Bilir, Neşe Yaralı, Fatma Burçin Kurtipek et al.
Diagnostics
Platelet Disorders and Treatments
article

Clinical Utility of a Targeted Next-Generation Sequencing Panel for Inherited Platelet Disorders in Children

Dilek Kaçar, Özlem Arman Bilir, Neşe Yaralı, Fatma Burçin Kurtipek, Mustafa Altan, Turan Bayhan, Namık Yaşar Özbek, Said Furkan Yıldırım
article en

Abstract

<b>Background/Objectives</b>: Inherited platelet disorders (IPDs) are diverse conditions characterized by abnormalities in platelet count and function. Next-Generation Sequencing (NGS) shows promise as a diagnostic tool in the diagnosis of IPDs. This study aims to assess the clinical value and limitations of using a targeted NGS panel in diagnosing children with suspected IPDs. <b>Methods</b>: We conducted a retrospective study of 93 children evaluated for suspected IPDs. A targeted NGS panel of 14 IPD-associated genes (<i>RUNX1</i>, <i>WAS</i>, <i>ADAMTS13</i>, <i>ANKRD26</i>, <i>CYCS</i>, <i>GATA1</i>, <i>GP1BA</i>, <i>GB1BB</i>, <i>GP9</i>, <i>ITGA2B</i>, <i>ITGB3</i>, <i>MASTL</i>, <i>MPL</i>, <i>MYH9</i>) was performed. <b>Results</b>: Genetic variants were identified in 30 patients (32.3% of the cohort). A total of 37 variants, of which 15 (40.5%) were novel, were found across 11 of the 14 genes on the panel (all except <i>MPL</i>, <i>CYCS</i>, and <i>RUNX1</i>). Variants were most frequently found in <i>ITGB3</i> (18.9% of variants), <i>GP1BA</i> (16.2%), and <i>ADAMTS13</i> (16.2%) genes. The majority of variants (64.9%) were classified as variants of uncertain significance (VUS), followed by likely pathogenic (LP) (27%) and pathogenic (8.1%) variants. Most variants were in a heterozygous state (73%). Specific cases highlighted complex genetic scenarios, such as co-occurring variants, and the identification of pathogenic and LP variants in patients initially presenting with immune thrombocytopenia. <b>Conclusions</b>: NGS helps to identify genetic causes, assess risk, manage, and provide genetic counseling in the management of IPDs. However, the prevalence of VUS underscores the need for a multidisciplinary approach to evaluate NGS results accurately.

DiagnosticsVol. 15(17)
Ankara University (TR), Bilkent University (TR), University of Health Science (KH), Memorial Ankara Hospital (TR), Başkent University Hospital (TR), Sağlık Bilimleri Üniversitesi (TR)
Openalex Percentile: Top 70%
Platelet Disorders and Treatments
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.