LCMS/MS-based mining of the peptaibiome: A discovery of new peptaibols

In this study, we employed liquid chromatography–tandem mass spectrometry (LC–MS/MS) to perform chemo-profiling on four fungal species: three Trichoderma species—two strains of Trichoderma asperellum (S3-3 and S3-1) and one Trichoderma longibrachiatum (FS-46)—and one species from the Tolypocladium genus, Tolypocladium inflatum (MTCC-3538). Our analysis identified 78 peptaibols featuring α-aminoisobutyric acid (Aib). Among these, we discovered both cyclic and linear Peptaibols and lipopeptaibols with Aib, ranging in putative molecular weights from 1033.4 to 1953.6 g/mol, corresponding to peptide lengths of 10-20 amino acids. In total, 78 peptaibols, including lipopeptaibols, were identified through LC-MS/MS. Of these, 43 were recognized as new peptaibols based on mass fragmentation patterns and sequence data from the MS/MS analysis. Our findings suggest that LC-MS/MS-based large-scale studies of the peptaibiome will facilitate the discovery of novel peptaibols and provide a valuable reference for understanding the fragmentation patterns of peptaibols, cyclic peptaibols, and lipopeptaibols.

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Journal
ChemRxiv
Published
2025-09-01
DOI
https://doi.org/10.26434/chemrxiv-2025-l7nj9-v2
Primary Topic
Calcium signaling and nucleotide metabolism
Type
article
Field-Weighted Citation Impact
0.00

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article

LCMS/MS-based mining of the peptaibiome: A discovery of new peptaibols

Poonam Choudhary, Manoj Kushwaha, Sundeep Jaglan, Mohd Murtaza et al.
ChemRxiv
Calcium signaling and nucleotide metabolism
article

LCMS/MS-based mining of the peptaibiome: A discovery of new peptaibols

Poonam Choudhary, Manoj Kushwaha, Sundeep Jaglan, Mohd Murtaza, Vidushi Abrol, Andrew J. Wiemer, Sudha Shankar, Priya Kumari, Nisha Sharma, Rohit Singh
article en

Abstract

In this study, we employed liquid chromatography–tandem mass spectrometry (LC–MS/MS) to perform chemo-profiling on four fungal species: three Trichoderma species—two strains of Trichoderma asperellum (S3-3 and S3-1) and one Trichoderma longibrachiatum (FS-46)—and one species from the Tolypocladium genus, Tolypocladium inflatum (MTCC-3538). Our analysis identified 78 peptaibols featuring α-aminoisobutyric acid (Aib). Among these, we discovered both cyclic and linear Peptaibols and lipopeptaibols with Aib, ranging in putative molecular weights from 1033.4 to 1953.6 g/mol, corresponding to peptide lengths of 10-20 amino acids. In total, 78 peptaibols, including lipopeptaibols, were identified through LC-MS/MS. Of these, 43 were recognized as new peptaibols based on mass fragmentation patterns and sequence data from the MS/MS analysis. Our findings suggest that LC-MS/MS-based large-scale studies of the peptaibiome will facilitate the discovery of novel peptaibols and provide a valuable reference for understanding the fragmentation patterns of peptaibols, cyclic peptaibols, and lipopeptaibols.

ChemRxiv
University of Connecticut (US), Tel Aviv University (IL), Indian Institute of Integrative Medicine (IN), Academy of Scientific and Innovative Research (IN)
Department of Science and Technology, Ministry of Science and Technology, India, Council of Scientific and Industrial Research, India
Openalex Percentile: Top 76%
Calcium signaling and nucleotide metabolism
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