Efficient extraction of high molecular weight dsDNA from bacteriophage (QIAGEN silica-based membrane method) v1

High molecular weight DNA can be efficiently extracted from dsDNA bacteriophages (phage) using a silica-based membrane method, such as the QIAGEN DNeasy Blood & Tissue Kit, with some modifications to significantly reduce the impact from host cell DNA contamination. Users can expect phage DNA concentrations of 2 to 100 ng/uL in 40 uL of elution buffer (median of approximately 15 ng/uL) if extracted from 450 uL of phage lysate containing > 1 x 109 PFU/mL. The concentration and yield of phage DNA is appropriate for long read whole genome sequencing, such as Oxford Nanopore Technology.

Authors

Institutions

Publication Details

Published
2025-09-01
DOI
https://doi.org/10.17504/protocols.io.8epv5k2m6v1b/v1
Citations
1
Primary Topic
Bacteriophages and microbial interactions
Type
article
Field-Weighted Citation Impact
1.72
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Efficient extraction of high molecular weight dsDNA from bacteriophage (QIAGEN silica-based membrane method) v1

M. Hedges, Samuel Montgomery
1 citations
Bacteriophages and microbial interactions
1.72
article

Efficient extraction of high molecular weight dsDNA from bacteriophage (QIAGEN silica-based membrane method) v1

M. Hedges, Samuel Montgomery
article en
1 citations

Abstract

High molecular weight DNA can be efficiently extracted from dsDNA bacteriophages (phage) using a silica-based membrane method, such as the QIAGEN DNeasy Blood & Tissue Kit, with some modifications to significantly reduce the impact from host cell DNA contamination. Users can expect phage DNA concentrations of 2 to 100 ng/uL in 40 uL of elution buffer (median of approximately 15 ng/uL) if extracted from 450 uL of phage lysate containing > 1 x 109 PFU/mL. The concentration and yield of phage DNA is appropriate for long read whole genome sequencing, such as Oxford Nanopore Technology.

The Kids Research Institute Australia (AU)
Openalex Percentile: Top 14%
Bacteriophages and microbial interactions
1.72
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.