An NGS-assisted diagnostic workflow for culture-independent detection of bloodstream pathogens and prediction of antimicrobial resistances in sepsis

PISTE technology exhibited high diagnostic accuracy and significantly reduced turnaround time compared to conventional cultures, supporting its potential as a short turnaround time and reliable diagnostic tool for bloodstream infections. Further optimization and validation in larger cohorts are warranted to enhance clinical implementation and improve antimicrobial stewardship in sepsis management.

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Publication Details

Journal
Frontiers in Cellular and Infection Microbiology
Published
2025-09-01
DOI
https://doi.org/10.3389/fcimb.2025.1656171
Citations
5
Primary Topic
Bacterial Identification and Susceptibility Testing
Type
article
Field-Weighted Citation Impact
6.59
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article

An NGS-assisted diagnostic workflow for culture-independent detection of bloodstream pathogens and prediction of antimicrobial resistances in sepsis

Garyphallia Poulakou, Manuele Biazzo, Panagiotis Koufargyris, Elisavet Tasouli et al.
5 citations
Frontiers in Cellular and Infection Microbiology
Bacterial Identification and Susceptibility Testing
6.59
article

An NGS-assisted diagnostic workflow for culture-independent detection of bloodstream pathogens and prediction of antimicrobial resistances in sepsis

Garyphallia Poulakou, Manuele Biazzo, Panagiotis Koufargyris, Elisavet Tasouli, David Pinzauti, Christine Podrini, Styliani Sympardi, Asimina Safarika, Georgia Damoraki, Antonia Alevizou, Ilias Skopelitis, Evangelos J. Giamarellos-Bourbolis
article en
5 citations

Abstract

PISTE technology exhibited high diagnostic accuracy and significantly reduced turnaround time compared to conventional cultures, supporting its potential as a short turnaround time and reliable diagnostic tool for bloodstream infections. Further optimization and validation in larger cohorts are warranted to enhance clinical implementation and improve antimicrobial stewardship in sepsis management.

Frontiers in Cellular and Infection MicrobiologyVol. 15
National and Kapodistrian University of Athens (GR), Thriasio General Hospital of Elefsina (GR), General Hospital of Nikea (GR), Biota Pharmaceuticals (United States) (US), Prolepsis Institute (GR)
Openalex Percentile: Top 3%
Bacterial Identification and Susceptibility Testing
6.59
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An NGS-assisted diagnostic workflow for culture-independent detection of bloodstream pathogens and prediction of antimicrobial resistances in sepsis — Garyphallia Poulakou, Manuele Biazzo, et al. · Frontiers in Cellular and Infection Microbiology (2025) | TGRS Research Map | TGRS