BVSim: A benchmarking variation simulator mimicking human variation spectrum
BVSim is written in Python and freely available to noncommercial users under the GPL3 license. Source code, application guide, and toy examples are provided on the GitHub page at https://github.com/YongyiLuo98/BVSim. The tool is registered in SciCrunch (RRID:SCR_026926), bio.tools (biotools:BVSim), and WorkflowHub (doi:10.48546/WORKFLOWHUB.WORKFLOW.1361.1).
Authors
- Sheng Lian (ORCID: https://orcid.org/0000-0002-0773-8329)
- Jingyu Hao
- Yongyi Luo (ORCID: https://orcid.org/0000-0002-0447-329X)
- Toyotaka Ishibashi (ORCID: https://orcid.org/0000-0001-8015-2319)
- Xiaodan Fan (ORCID: https://orcid.org/0000-0002-2744-9030)
- Jiandong Shi (ORCID: https://orcid.org/0000-0002-5178-8470)
- Taobo Hu (ORCID: https://orcid.org/0000-0001-5124-7167)
- Weichuan Yu
- Shu Wang (ORCID: https://orcid.org/0000-0002-8651-4795)
- Zhen Zhang (ORCID: https://orcid.org/0000-0001-7905-7269)
- Depeng Wang (ORCID: https://orcid.org/0000-0001-9014-710X)
Institutions
- Chinese University of Hong Kong (HK)
- Hong Kong University of Science and Technology (HK)
- Peking University (CN)
- Peking University People's Hospital (CN)
- Nextomics Biosciences (China) (CN)
- Grandomics (China) (CN)
- University of Hong Kong (HK)
Publication Details
- Journal
- GigaScience
- Published
- 2025-01-01
- DOI
- https://doi.org/10.1093/gigascience/giaf095
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Research Grants Council, University Grants Committee
- Government of Jiangxi Province
- Chinese University of Hong Kong
- Hong Kong University of Science and Technology
- Innovation and Technology Commission - Hong Kong