Autocycler: long-read consensus assembly for bacterial genomes
Autocycler is implemented in Rust, open-source, and freely available at github.com/rrwick/Autocycler. It runs on Linux and macOS and is extensively documented.
Authors
- Benjamin P. Howden (ORCID: https://orcid.org/0000-0003-0237-1473)
- Timothy P. Stinear (ORCID: https://orcid.org/0000-0003-0150-123X)
- Ryan R. Wick (ORCID: https://orcid.org/0000-0001-8349-0778)
Institutions
- The University of Melbourne (AU)
- Peter Doherty Institute (AU)
- Melbourne Genomics Health Alliance (AU)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-08-25
- DOI
- https://doi.org/10.1093/bioinformatics/btaf474
- Citations
- 19
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 15.31
Funders
- State Government of Victoria
- Centers for Disease Control and Prevention
- National Health and Medical Research Council
- Institute of Infection and Immunity