The Radical <i>S</i>-Adenosyl-<scp>l</scp>-methionine Enzyme HydE Forms an Fe(I)Fe(I) Dimer En Route to the [FeFe] Hydrogenase H-Cluster

[FeFe] hydrogenases are highly efficient metalloenzymes that catalyze hydrogen conversion via a sophisticated active site cofactor known as the H-cluster. Biosynthesis of its [2Fe]<sub>H</sub> subcluster, which contains CO, CN<sup>-</sup>, and azadithiolate ligands, requires the action of several dedicated enzymes, including the radical <i>S</i>-adenosyl-l-methionine (rSAM) enzyme HydE. HydE has been proposed to convert a mononuclear [Fe(II)(cysteinate)(CO)<sub>2</sub>(CN)]<sup>-</sup> precursor into a dimeric [Fe<sup>I</sup><sub>2</sub>(SH)<sub>2</sub>(CO)<sub>4</sub>(CN)<sub>2</sub>]<sup>2-</sup> complex, yet direct characterization of this product species has remained elusive. Here, we report spectroscopic identification of the dimeric product of the HydE reaction in its one-electron oxidized, mixed-valent Fe<sup>1.5+</sup>Fe<sup>1.5+</sup> (<i>S</i> = 1/2) state. Continuous wave and pulse <sup>13</sup>C ENDOR spectroscopy confirm the presence of two nonequivalent CN<sup>-</sup> ligands and delocalized spin density across the diiron core. Oxidation of a synthetic [Fe<sub>2</sub>(SH)<sub>2</sub>(CO)<sub>4</sub>(CN)<sub>2</sub>]<sup>2-</sup> complex reproduces similar electron paramagnetic resonance features only when it is preincubated with HydE, supporting in situ formation and stabilization of the dimer by the enzyme. These findings implicate the Fe<sup>I</sup>Fe<sup>I</sup> dimer as the terminal product of HydE and strongly suggest its central role in H-cluster assembly, expanding our understanding of rSAM enzyme catalysis in metallocofactor biosynthesis.

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Publication Details

Journal
Journal of the American Chemical Society
Published
2025-08-28
DOI
https://doi.org/10.1021/jacs.5c08533
Citations
2
Primary Topic
Metalloenzymes and iron-sulfur proteins
Type
article
Field-Weighted Citation Impact
0.73

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article

The Radical S-Adenosyl-l-methionine Enzyme HydE Forms an Fe(I)Fe(I) Dimer En Route to the [FeFe] Hydrogenase H-Cluster

Thomas B. Rauchfuss, Lizhi Tao, Xin Yu, Guodong Rao et al.
2 citations
Journal of the American Chemical Society
Metalloenzymes and iron-sulfur proteins
0.73
article

The Radical S-Adenosyl-l-methionine Enzyme HydE Forms an Fe(I)Fe(I) Dimer En Route to the [FeFe] Hydrogenase H-Cluster

Thomas B. Rauchfuss, Lizhi Tao, Xin Yu, Guodong Rao, R. David Britt
article en
2 citations

Abstract

[FeFe] hydrogenases are highly efficient metalloenzymes that catalyze hydrogen conversion via a sophisticated active site cofactor known as the H-cluster. Biosynthesis of its [2Fe]<sub>H</sub> subcluster, which contains CO, CN<sup>-</sup>, and azadithiolate ligands, requires the action of several dedicated enzymes, including the radical <i>S</i>-adenosyl-l-methionine (rSAM) enzyme HydE. HydE has been proposed to convert a mononuclear [Fe(II)(cysteinate)(CO)<sub>2</sub>(CN)]<sup>-</sup> precursor into a dimeric [Fe<sup>I</sup><sub>2</sub>(SH)<sub>2</sub>(CO)<sub>4</sub>(CN)<sub>2</sub>]<sup>2-</sup> complex, yet direct characterization of this product species has remained elusive. Here, we report spectroscopic identification of the dimeric product of the HydE reaction in its one-electron oxidized, mixed-valent Fe<sup>1.5+</sup>Fe<sup>1.5+</sup> (<i>S</i> = 1/2) state. Continuous wave and pulse <sup>13</sup>C ENDOR spectroscopy confirm the presence of two nonequivalent CN<sup>-</sup> ligands and delocalized spin density across the diiron core. Oxidation of a synthetic [Fe<sub>2</sub>(SH)<sub>2</sub>(CO)<sub>4</sub>(CN)<sub>2</sub>]<sup>2-</sup> complex reproduces similar electron paramagnetic resonance features only when it is preincubated with HydE, supporting in situ formation and stabilization of the dimer by the enzyme. These findings implicate the Fe<sup>I</sup>Fe<sup>I</sup> dimer as the terminal product of HydE and strongly suggest its central role in H-cluster assembly, expanding our understanding of rSAM enzyme catalysis in metallocofactor biosynthesis.

Journal of the American Chemical SocietyVol. 147(36)
University of Illinois Urbana-Champaign (US), University of California System (US), University of California, Davis (US)
National Institutes of Health
Openalex Percentile: Top 28%
Metalloenzymes and iron-sulfur proteins
0.73
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