H2B.W2, a spermatocyte-specific histone variant, disrupts nucleosome stability, and reduces chromatin compaction
Spermatogenesis is a highly regulated process that requires precise chromatin remodeling, which includes the incorporation of testis-specific histone variants. While several of these variants have been characterized, the role of H2B.W2, a member of the H2BW family, remains largely unclear. Here, we showed that H2B.W2 expression occurs mainly in spermatocytes, slightly later than its paralog H2B.W1. Cryo-electron microscopy analysis of H2B.W2-containing nucleosomes reveals a more relaxed conformation compared to canonical nucleosomes caused by weakened interactions between the outer DNA turn and the histone core. We pinpointed the N-terminal tail and α2 helix of H2B.W2 as critical regions for nucleosome destabilization. Furthermore, we identify G73 within the L1 loop as a key residue involved in disrupting higher-order chromatin structure. Our findings suggest that H2B.W2-mediated nucleosome and chromatin destabilization may play a role in regulating gene expression during spermatogenesis, with potential implications for sperm development and function.
Authors
- Thi Thuy Nguyen (ORCID: https://orcid.org/0000-0002-5584-1013)
- Xingpeng Bai
- Toyotaka Ishibashi (ORCID: https://orcid.org/0000-0001-8015-2319)
- Mingxi Deng (ORCID: https://orcid.org/0000-0001-6661-8506)
- Matthew Yu Hin Pang (ORCID: https://orcid.org/0000-0003-3758-6140)
- Yuanliang Zhai (ORCID: https://orcid.org/0000-0002-8897-6416)
- Dongbo Ding (ORCID: https://orcid.org/0000-0003-3515-8679)
- Yan Yan (ORCID: https://orcid.org/0000-0001-6656-7737)
- Yingyi Zhang (ORCID: https://orcid.org/0000-0003-1020-7964)
- Ting Jin
- Zhichun Xu
- Yue Liu (ORCID: https://orcid.org/0009-0001-6279-7815)
Institutions
- Hong Kong University of Science and Technology (HK)
- Hong Kong Science and Technology Parks Corporation (HK)
- Institute of Biophysics (CN)
- Peking University Shenzhen Hospital (CN)
- Guangzhou HKUST Fok Ying Tung Research Institute (CN)
- University of Hong Kong (HK)
Publication Details
- Journal
- Nucleic Acids Research
- Published
- 2025-08-27
- DOI
- https://doi.org/10.1093/nar/gkaf825
- Primary Topic
- Genomics and Chromatin Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China
- Science, Technology and Innovation Commission of Shenzhen Municipality