In silico characterization, physiochemical analysis, and antifungal evaluation of the Zea mays PR-1 protein

Pathogenesis-related protein 1 (PR-1) is a critical component of plant defense mechanisms, exhibiting significant antifungal activity. This study focused on the PR-1 protein from Zea mays and five other plant species (Triticum aestivum, Hordeum vulgare, Oryza sativa, Avena sativa, and Secale cereale) to explore their physicochemical, structural, and functional characteristics. The PR-1 gene from Z. mays was isolated and expressed in Escherichia coli BL21-DE3 cells, enabling structural characterization. Recombinant expression in E. coli enabled structural characterization and functional studies of the PR-1 protein, laying a foundation for future experiments. Sequence analysis revealed high similarity (65-90%) among PR-1 proteins across species, although physicochemical properties varied based on plant origin. Structural analysis showed a conserved beta-barrel structure surrounded by alpha-helices in all PR-1 proteins. In addition to in silico and structural characterization, antifungal bioassays were performed using the purified recombinant PR-1 protein against Fusarium oxysporum, a major fungal phytopathogen. These assays demonstrated notable antifungal activity, supporting the predicted defense role of PR-1 and laying experimental groundwork for its potential use in developing fungi-resistant transgenic crops.

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Journal
Scientific Reports
Published
2025-08-27
DOI
https://doi.org/10.1038/s41598-025-16772-1
Primary Topic
Plant-Microbe Interactions and Immunity
Type
article
Field-Weighted Citation Impact
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article

In silico characterization, physiochemical analysis, and antifungal evaluation of the Zea mays PR-1 protein

Asma Zulfiqar, Shifa Shaffique, Anis Ali Shah, Muhammad Aksam Iftikhar et al.
Scientific Reports
Plant-Microbe Interactions and Immunity
article

In silico characterization, physiochemical analysis, and antifungal evaluation of the Zea mays PR-1 protein

Asma Zulfiqar, Shifa Shaffique, Anis Ali Shah, Muhammad Aksam Iftikhar, Sumaia Saif, Ammara Saleem, Mohammad K. Okla, Zaher Uddin Babar, Muhammad Saleem, Ibrahim A. Alaraidh, Nauman Ahmad
article en

Abstract

Pathogenesis-related protein 1 (PR-1) is a critical component of plant defense mechanisms, exhibiting significant antifungal activity. This study focused on the PR-1 protein from Zea mays and five other plant species (Triticum aestivum, Hordeum vulgare, Oryza sativa, Avena sativa, and Secale cereale) to explore their physicochemical, structural, and functional characteristics. The PR-1 gene from Z. mays was isolated and expressed in Escherichia coli BL21-DE3 cells, enabling structural characterization. Recombinant expression in E. coli enabled structural characterization and functional studies of the PR-1 protein, laying a foundation for future experiments. Sequence analysis revealed high similarity (65-90%) among PR-1 proteins across species, although physicochemical properties varied based on plant origin. Structural analysis showed a conserved beta-barrel structure surrounded by alpha-helices in all PR-1 proteins. In addition to in silico and structural characterization, antifungal bioassays were performed using the purified recombinant PR-1 protein against Fusarium oxysporum, a major fungal phytopathogen. These assays demonstrated notable antifungal activity, supporting the predicted defense role of PR-1 and laying experimental groundwork for its potential use in developing fungi-resistant transgenic crops.

Scientific ReportsVol. 15(1)
University of the Punjab (PK), King Saud University (SA), University of Okara (PK), Kyungpook National University (KR), Centre of Excellence in Molecular Biology (PK), University of Education (PK)
King Saud University
Zero hunger
Openalex Percentile: Top 83%
Plant-Microbe Interactions and Immunity
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