Seeking Common Ground While Reserving Differences: Multiple Anatomy Collaborative Framework for Undersampled MRI Reconstruction

Recently, deep neural networks have greatly advanced undersampled Magnetic Resonance Image (MRI) reconstruction, wherein most studies follow the one-anatomy-one-network fashion, i.e., each expert network is trained and evaluated for a specific anatomy. Apart from inefficiency in training multiple independent models, such convention ignores the shared de-aliasing knowledge across various anatomies which can benefit each other. To explore the shared knowledge, one naive way is to combine all the data from various anatomies to train an all-round network. Unfortunately, despite the existence of the shared de-aliasing knowledge, we reveal that the exclusive knowledge across different anatomies can deteriorate specific reconstruction targets, yielding overall performance degradation. Observing this, in this study, we present a novel deep MRI reconstruction framework with both anatomy-shared and anatomy-specific parameterized learners, aiming to "seek common ground while reserving differences" across different anatomies. Particularly, the primary anatomy-shared learners are exposed to different anatomies to model rich shared de-aliasing knowledge, while the efficient anatomy-specific learners are trained with their target anatomy for exclusive knowledge. Four different implementations of anatomy-specific learners are presented and explored on the top of our framework in two MRI reconstruction networks. Comprehensive experiments on brain, knee and cardiac MRI datasets demonstrate that three of these learners are able to enhance reconstruction performance via multiple anatomy collaborative learning. Extensive studies show that our strategy can also benefit multiple pulse sequence MRI reconstruction by integrating sequence-specific learners.

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Publication Details

Journal
IEEE Journal of Biomedical and Health Informatics
Published
2025-01-01
DOI
https://doi.org/10.1109/jbhi.2025.3602999
Primary Topic
Advanced MRI Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

Seeking Common Ground While Reserving Differences: Multiple Anatomy Collaborative Framework for Undersampled MRI Reconstruction

Xiu Li, Jiangpeng Yan, Junzhou Huang, Zhe Xu et al.
IEEE Journal of Biomedical and Health Informatics
Advanced MRI Techniques and Applications
article

Seeking Common Ground While Reserving Differences: Multiple Anatomy Collaborative Framework for Undersampled MRI Reconstruction

Xiu Li, Jiangpeng Yan, Junzhou Huang, Zhe Xu, Chenghui Yu, Jianhua Yao, Hanbo Chen
article en

Abstract

Recently, deep neural networks have greatly advanced undersampled Magnetic Resonance Image (MRI) reconstruction, wherein most studies follow the one-anatomy-one-network fashion, i.e., each expert network is trained and evaluated for a specific anatomy. Apart from inefficiency in training multiple independent models, such convention ignores the shared de-aliasing knowledge across various anatomies which can benefit each other. To explore the shared knowledge, one naive way is to combine all the data from various anatomies to train an all-round network. Unfortunately, despite the existence of the shared de-aliasing knowledge, we reveal that the exclusive knowledge across different anatomies can deteriorate specific reconstruction targets, yielding overall performance degradation. Observing this, in this study, we present a novel deep MRI reconstruction framework with both anatomy-shared and anatomy-specific parameterized learners, aiming to "seek common ground while reserving differences" across different anatomies. Particularly, the primary anatomy-shared learners are exposed to different anatomies to model rich shared de-aliasing knowledge, while the efficient anatomy-specific learners are trained with their target anatomy for exclusive knowledge. Four different implementations of anatomy-specific learners are presented and explored on the top of our framework in two MRI reconstruction networks. Comprehensive experiments on brain, knee and cardiac MRI datasets demonstrate that three of these learners are able to enhance reconstruction performance via multiple anatomy collaborative learning. Extensive studies show that our strategy can also benefit multiple pulse sequence MRI reconstruction by integrating sequence-specific learners.

IEEE Journal of Biomedical and Health InformaticsVol. PP
Chinese University of Hong Kong (HK), The University of Texas at Arlington (US), Tencent (China) (CN), Tencent Healthcare (China) (CN), Tsinghua–Berkeley Shenzhen Institute (CN)
Openalex Percentile: Top 69%
Advanced MRI Techniques and Applications
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