A chromosome-level genome assembly of Wurfbainia villosa (Zingiberaceae)

Wurfbainia villosa is a well-known medicinal plant widely distributed in southern China and Southeast Asia. Its dried fruits, known as Fructus Amomi in traditional Chinese medicine, are commonly used for treating gastrointestinal disease. In this study, the de novo chromosome-level genome assembly was generated for this diploid plant. The assembled genome was approximately 2,731.09 Mb in length, with a contig N50 of 30.23 Mb. Approximately 99.91% of the assembled sequences were anchored onto 24 pseudochromosomes. A total of 42,713 genes were annotated, along with 88.83% of repetitive elements. These genomic resources provide valuable foundations for future research on active component biosynthesis, functional genomics, and DNA-informed breeding of W. villosa.

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Publication Details

Journal
Scientific Data
Published
2025-08-26
DOI
https://doi.org/10.1038/s41597-025-05874-0
Citations
1
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
0.81

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article

A chromosome-level genome assembly of Wurfbainia villosa (Zingiberaceae)

Yingmin Zhang, Cong-Wei Yang, Guodong Li, Hui Li
1 citations
Scientific Data
Genomics and Phylogenetic Studies
0.81
article

A chromosome-level genome assembly of Wurfbainia villosa (Zingiberaceae)

Yingmin Zhang, Cong-Wei Yang, Guodong Li, Hui Li
article en
1 citations

Abstract

Wurfbainia villosa is a well-known medicinal plant widely distributed in southern China and Southeast Asia. Its dried fruits, known as Fructus Amomi in traditional Chinese medicine, are commonly used for treating gastrointestinal disease. In this study, the de novo chromosome-level genome assembly was generated for this diploid plant. The assembled genome was approximately 2,731.09 Mb in length, with a contig N50 of 30.23 Mb. Approximately 99.91% of the assembled sequences were anchored onto 24 pseudochromosomes. A total of 42,713 genes were annotated, along with 88.83% of repetitive elements. These genomic resources provide valuable foundations for future research on active component biosynthesis, functional genomics, and DNA-informed breeding of W. villosa.

Scientific DataVol. 12(1)
Yunnan University (CN), Yunnan University of Traditional Chinese Medicine (CN)
National Natural Science Foundation of China, Yunnan University, Yunnan Provincial Science and Technology Department
Openalex Percentile: Top 24%
Genomics and Phylogenetic Studies
0.81
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