Total Synthesis of Verlamelin A and (5<i>R</i>)-Verlamelin A with Antifungal Activity

Verlamelin A is a naturally occurring macrocyclic depsipeptide exhibiting high and broad-spectrum antifungal activity. The first unified total synthesis of verlamelin A and its (5<i>R</i>)-verlamelin A (C5-epimer) is reported. This strategy involved homogeneous solution-phase synthesis of Fmoc-l-Val-O-(5<i>S</i>/5<i>R</i>)-tetradecanoic acid, solid-phase peptide synthesis of pentapeptide NH<sub>2</sub>-d-allo-Thr-d-Ala-l-Pro-l-Gln-d-Tyr-OH, on-resin coupling of these two fragments to form a linear precursor <b>17</b>, and off-resin cyclization followed by global deprotection to generate the final verlamelin A and (5<i>R</i>)-verlamelin A in 6.8 and 7.8% overall yields, respectively. <sup>1</sup>H/<sup>13</sup>C{<sup>1</sup>H} NMR, HRMS, and analytic HPLC were performed to confirm our successful total synthesis of verlamelin A. Antimicrobial evaluation revealed that both compounds exhibited potent antifungal activity against <i>Alternaria alternate</i>, <i>Alternaria solani</i>, and <i>Rhizoctonia solani</i> with MIC values ranging from 4 to 16 μg/mL. (5<i>R</i>)-verlamelin A showed superior efficacy against <i>A. alternate</i> (MIC = 4 μg/mL) compared with verlamelin A (MIC = 8 μg/mL), suggesting its potential as a lead antifungal candidate for further development against this pathogen.

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Publication Details

Journal
The Journal of Organic Chemistry
Published
2025-08-26
DOI
https://doi.org/10.1021/acs.joc.5c01629
Primary Topic
Chemical synthesis and alkaloids
Type
article
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article

Total Synthesis of Verlamelin A and (5R)-Verlamelin A with Antifungal Activity

Bin Yang, Huayan Xu, Shengrong Liao, Xin Sun et al.
The Journal of Organic Chemistry
Chemical synthesis and alkaloids
article

Total Synthesis of Verlamelin A and (5R)-Verlamelin A with Antifungal Activity

Bin Yang, Huayan Xu, Shengrong Liao, Xin Sun, Zheng‐Fei Yan, Wenbin Lin, Yonghong Liu, Yonghong Li, Bin Wang, Yuyue Li
article en

Abstract

Verlamelin A is a naturally occurring macrocyclic depsipeptide exhibiting high and broad-spectrum antifungal activity. The first unified total synthesis of verlamelin A and its (5<i>R</i>)-verlamelin A (C5-epimer) is reported. This strategy involved homogeneous solution-phase synthesis of Fmoc-l-Val-O-(5<i>S</i>/5<i>R</i>)-tetradecanoic acid, solid-phase peptide synthesis of pentapeptide NH<sub>2</sub>-d-allo-Thr-d-Ala-l-Pro-l-Gln-d-Tyr-OH, on-resin coupling of these two fragments to form a linear precursor <b>17</b>, and off-resin cyclization followed by global deprotection to generate the final verlamelin A and (5<i>R</i>)-verlamelin A in 6.8 and 7.8% overall yields, respectively. <sup>1</sup>H/<sup>13</sup>C{<sup>1</sup>H} NMR, HRMS, and analytic HPLC were performed to confirm our successful total synthesis of verlamelin A. Antimicrobial evaluation revealed that both compounds exhibited potent antifungal activity against <i>Alternaria alternate</i>, <i>Alternaria solani</i>, and <i>Rhizoctonia solani</i> with MIC values ranging from 4 to 16 μg/mL. (5<i>R</i>)-verlamelin A showed superior efficacy against <i>A. alternate</i> (MIC = 4 μg/mL) compared with verlamelin A (MIC = 8 μg/mL), suggesting its potential as a lead antifungal candidate for further development against this pathogen.

The Journal of Organic ChemistryVol. 90(35)
Shenyang Pharmaceutical University (CN), Guangzhou University of Chinese Medicine (CN), Institute of Oceanology (CN), Integrated Chinese Medicine (China) (HK), South China Sea Institute Of Oceanology (CN), Chinese University of Hong Kong, Shenzhen (CN), Shenzhen Pingle Orthopedic Hospital (CN), University of Chinese Academy of Sciences (CN)
Zero hunger
Openalex Percentile: Top 83%
Chemical synthesis and alkaloids
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