Benchmarking of low coverage sequencing workflows for precision genotyping in eggplant
This study highlights the importance of using a gold standard to reduce false positives and demonstrates that lcWGS, with proper filtering, is a valuable alternative to high-coverage sequencing for eggplant genotyping, with potential applications to other crops.
Authors
- Andrea Arrones (ORCID: https://orcid.org/0000-0003-3926-0291)
- Santiago Vilanova (ORCID: https://orcid.org/0000-0003-4939-9713)
- Pietro Gramazio (ORCID: https://orcid.org/0000-0003-2226-7999)
- Aureliano Bombarely (ORCID: https://orcid.org/0000-0001-6257-8914)
- Virginia Baraja-Fonseca (ORCID: https://orcid.org/0000-0001-9072-4771)
- Mariola Plazas (ORCID: https://orcid.org/0000-0001-8090-7312)
Institutions
- Instituto de Biología Molecular y Celular de Plantas (ES)
- Universitat Politècnica de València (ES)
Publication Details
- Journal
- BMC Plant Biology
- Published
- 2025-08-25
- DOI
- https://doi.org/10.1186/s12870-025-07242-x
- Citations
- 2
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 1.61