Potent Inhibition of Human Betacoronaviruses by a Short Double-Stapled Peptide Mimicking the HR2 Core Region in Viral Spike Protein

A small hexameric coiled-coil fusion complex formed by the interaction between α-helical motif of heptad repeat 2 (HR2<sub>core</sub>) and HR1 core site (HR1<sub>core</sub>) in human betacoronavirus spike protein plays a crucial role in facilitating membrane fusion. Formation of the six-helix bundle involves the evolutionary conservation of key residues in the HR1<sub>core</sub> region. Therefore, to recapitulate the native conformation of the HR2<sub>core</sub> peptide α-helix and the HR1<sub>core</sub> site conserved residues, we employed hydrocarbon double-stapling. The resulting all-hydrocarbon stapled peptide M2PA shows highly potent and broad-spectrum antiviral activity against SARS-CoV-2 and its emerging variants, as well as other betacoronaviruses tested. Also, M2PA is effective against authentic SARS-CoV-2 infection in vivo, and it possesses outstanding pharmacokinetic properties. This represents the first successful minimization of a pan-coronavirus inhibitor to an HR2<sub>core</sub>-based α-helical peptide, and as such, M2PA peptide stands as a promising candidate for drug development to combat coronavirus pandemics.

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Publication Details

Journal
Journal of Medicinal Chemistry
Published
2025-08-22
DOI
https://doi.org/10.1021/acs.jmedchem.5c01614
Citations
2
Primary Topic
SARS-CoV-2 and COVID-19 Research
Type
article
Field-Weighted Citation Impact
2.79

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article

Potent Inhibition of Human Betacoronaviruses by a Short Double-Stapled Peptide Mimicking the HR2 Core Region in Viral Spike Protein

Junhai Xiao, Ming Yuan, Xiaomei Zhuang, Yuanzhou Wang et al.
2 citations
Journal of Medicinal Chemistry
SARS-CoV-2 and COVID-19 Research
2.79
article

Potent Inhibition of Human Betacoronaviruses by a Short Double-Stapled Peptide Mimicking the HR2 Core Region in Viral Spike Protein

Junhai Xiao, Ming Yuan, Xiaomei Zhuang, Yuanzhou Wang, Yu Yuan, Shibo Jiang, Xusheng Du, Qian Wang, Weiguo Shi, Huan Wang, Lu Lu, Qing Li, Chao Wang, Fei Wang, Wenpeng Zhang, Jie Zhou, Gang‐Ping Xue, Jiahuang Tu, Shu Shan Du, Longbo Zheng, Binbin Xu
article en
2 citations

Abstract

A small hexameric coiled-coil fusion complex formed by the interaction between α-helical motif of heptad repeat 2 (HR2<sub>core</sub>) and HR1 core site (HR1<sub>core</sub>) in human betacoronavirus spike protein plays a crucial role in facilitating membrane fusion. Formation of the six-helix bundle involves the evolutionary conservation of key residues in the HR1<sub>core</sub> region. Therefore, to recapitulate the native conformation of the HR2<sub>core</sub> peptide α-helix and the HR1<sub>core</sub> site conserved residues, we employed hydrocarbon double-stapling. The resulting all-hydrocarbon stapled peptide M2PA shows highly potent and broad-spectrum antiviral activity against SARS-CoV-2 and its emerging variants, as well as other betacoronaviruses tested. Also, M2PA is effective against authentic SARS-CoV-2 infection in vivo, and it possesses outstanding pharmacokinetic properties. This represents the first successful minimization of a pan-coronavirus inhibitor to an HR2<sub>core</sub>-based α-helical peptide, and as such, M2PA peptide stands as a promising candidate for drug development to combat coronavirus pandemics.

Journal of Medicinal ChemistryVol. 68(17)
Shenyang Pharmaceutical University (CN), Shanghai Medical College of Fudan University (CN), Czech Academy of Sciences, Institute of Biotechnology (CZ), Drug Discovery Laboratory (Norway) (NO), Ministry of Education (BD), Institute of Pharmacology (CZ)
National Natural Science Foundation of China, Science and Technology Commission of Shanghai Municipality
Openalex Percentile: Top 9%
SARS-CoV-2 and COVID-19 Research
2.79
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