High Yield, Low Magnesium Flexizyme Reactions in a Water-Ice Eutectic Phase

Flexizymes enable the stoichiometric acylation of tRNAs with a variety of compounds, enabling the <i>in vitro</i> translation of peptides with both non-natural backbones and side chains. However, flexizyme reactions have several drawbacks, including single-turnover kinetics, high Mg(II) carryover, inhibiting <i>in vitro</i> translation, and rapid product hydrolysis. Here we present flexizyme reactions utilizing an ice-eutectic phase, with high yields, 30 times lower Mg(II), and long-term product stability. The eutectic flexizyme reactions increase the ease of use, yield and flexibility of aminoacylation and significantly increase the <i>in vitro</i> protein production.

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Publication Details

Journal
Biochemistry
Published
2025-08-20
DOI
https://doi.org/10.1021/acs.biochem.5c00371
Citations
1
Primary Topic
Chemical Synthesis and Analysis
Type
article
Field-Weighted Citation Impact
0.81

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article

High Yield, Low Magnesium Flexizyme Reactions in a Water-Ice Eutectic Phase

Isaac J. Knudson, Mace Blank, José Luís Pérez Alejo, Evan M. Kalb et al.
1 citations
Biochemistry
Chemical Synthesis and Analysis
0.81
article

High Yield, Low Magnesium Flexizyme Reactions in a Water-Ice Eutectic Phase

Isaac J. Knudson, Mace Blank, José Luís Pérez Alejo, Evan M. Kalb, Alanna Schepartz, Aaron E. Engelhart, Katarzyna P. Adamala, Joshua A. Davisson, Angelin Prasad
article en
1 citations

Abstract

Flexizymes enable the stoichiometric acylation of tRNAs with a variety of compounds, enabling the <i>in vitro</i> translation of peptides with both non-natural backbones and side chains. However, flexizyme reactions have several drawbacks, including single-turnover kinetics, high Mg(II) carryover, inhibiting <i>in vitro</i> translation, and rapid product hydrolysis. Here we present flexizyme reactions utilizing an ice-eutectic phase, with high yields, 30 times lower Mg(II), and long-term product stability. The eutectic flexizyme reactions increase the ease of use, yield and flexibility of aminoacylation and significantly increase the <i>in vitro</i> protein production.

BiochemistryVol. 64(17)
University of Minnesota (US), St. Jude Children's Research Hospital (US), University of Minnesota System (US), University of California System (US), GeneticaLens (United States) (US), Institut thématique Génétique, génomique et bioinformatique (FR), University of California, Berkeley (US)
National Science Foundation, Howard Hughes Medical Institute, Alfred P. Sloan Foundation
Clean water and sanitation
Openalex Percentile: Top 24%
Chemical Synthesis and Analysis
0.81
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