An Explainable Radiomics-Based Classification Model for Sarcoma Diagnosis

<b>Objective</b>: This study introduces an explainable, radiomics-based machine learning framework for the automated classification of sarcoma tumors using MRI. The approach aims to empower clinicians, reducing dependence on subjective image interpretation. <b>Methods</b>: A total of 186 MRI scans from 86 patients diagnosed with bone and soft tissue sarcoma were manually segmented to isolate tumor regions and corresponding healthy tissue. From these segmentations, 851 handcrafted radiomic features were extracted, including wavelet-transformed descriptors. A Random Forest classifier was trained to distinguish between tumor and healthy tissue, with hyperparameter tuning performed through nested cross-validation. To ensure transparency and interpretability, model behavior was explored through Feature Importance analysis and Local Interpretable Model-agnostic Explanations (LIME). <b>Results</b>: The model achieved an F1-score of 0.742, with an accuracy of 0.724 on the test set. LIME analysis revealed that texture and wavelet-based features were the most influential in driving the model's predictions. <b>Conclusions</b>: By enabling accurate and interpretable classification of sarcomas in MRI, the proposed method provides a non-invasive approach to tumor classification, supporting an earlier, more personalized and precision-driven diagnosis. This study highlights the potential of explainable AI to assist in more secure clinical decision-making.

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Publication Details

Journal
Diagnostics
Published
2025-08-20
DOI
https://doi.org/10.3390/diagnostics15162098
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
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article

An Explainable Radiomics-Based Classification Model for Sarcoma Diagnosis

Francesco Mercaldo, Marco Recenti, Vittoria Nardone, Arnar Evgení Gunnarsson et al.
Diagnostics
Radiomics and Machine Learning in Medical Imaging
article

An Explainable Radiomics-Based Classification Model for Sarcoma Diagnosis

Francesco Mercaldo, Marco Recenti, Vittoria Nardone, Arnar Evgení Gunnarsson, Halldór Jónsson, Paolo Gargiulo, Simona Correra, Antonella Santone
article en

Abstract

<b>Objective</b>: This study introduces an explainable, radiomics-based machine learning framework for the automated classification of sarcoma tumors using MRI. The approach aims to empower clinicians, reducing dependence on subjective image interpretation. <b>Methods</b>: A total of 186 MRI scans from 86 patients diagnosed with bone and soft tissue sarcoma were manually segmented to isolate tumor regions and corresponding healthy tissue. From these segmentations, 851 handcrafted radiomic features were extracted, including wavelet-transformed descriptors. A Random Forest classifier was trained to distinguish between tumor and healthy tissue, with hyperparameter tuning performed through nested cross-validation. To ensure transparency and interpretability, model behavior was explored through Feature Importance analysis and Local Interpretable Model-agnostic Explanations (LIME). <b>Results</b>: The model achieved an F1-score of 0.742, with an accuracy of 0.724 on the test set. LIME analysis revealed that texture and wavelet-based features were the most influential in driving the model's predictions. <b>Conclusions</b>: By enabling accurate and interpretable classification of sarcomas in MRI, the proposed method provides a non-invasive approach to tumor classification, supporting an earlier, more personalized and precision-driven diagnosis. This study highlights the potential of explainable AI to assist in more secure clinical decision-making.

DiagnosticsVol. 15(16)
Reykjavík University (IS), University of Molise (IT), National University Hospital of Iceland (IS)
Openalex Percentile: Top 70%
Radiomics and Machine Learning in Medical Imaging
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An Explainable Radiomics-Based Classification Model for Sarcoma Diagnosis — Francesco Mercaldo, Marco Recenti, et al. · Diagnostics (2025) | TGRS Research Map | TGRS