An efficient and interactive feature selection approach based on copula entropy for high-dimensional genetic data

Feature selection (FS) is especially important for high-dimensional data. In this paper, we propose an efficient and interactive feature selection approach based on copula entropy (CEFS+). The method combines feature-feature mutual information with feature-label mutual information and uses a maximum correlation minimum redundancy strategy for greedy selection. The approach uses copula entropy as a measure of feature relevance that captures the full-order interaction gain between features. Moreover, we prove the divisibility of multivariate mutual information, and derive a novel feature criterion, and propose a feature selection approach based on copula entropy called CEFS. Meanwhile, to overcome the instability of the CEFS method on some datasets, we propose the improved method CEFS+ which based on the rank technique. Finally, we evaluate the effectiveness of CEFS and CEFS+ using three classifiers on five datasets. In 10 out of 15 scenarios, our approach obtains the highest classification accuracy, which is much higher than the other six commonly used FS methods. In particular, our approach performs better on high-dimensional genetic datasets.

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Publication Details

Journal
Scientific Reports
Published
2025-08-17
DOI
https://doi.org/10.1038/s41598-025-15068-8
Citations
1
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
0.81

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article

An efficient and interactive feature selection approach based on copula entropy for high-dimensional genetic data

Yun Dang, Dongxi Li, Xiaoran Yan, Shun‐Li Shang
1 citations
Scientific Reports
Gene expression and cancer classification
0.81
article

An efficient and interactive feature selection approach based on copula entropy for high-dimensional genetic data

Yun Dang, Dongxi Li, Xiaoran Yan, Shun‐Li Shang
article en
1 citations

Abstract

Feature selection (FS) is especially important for high-dimensional data. In this paper, we propose an efficient and interactive feature selection approach based on copula entropy (CEFS+). The method combines feature-feature mutual information with feature-label mutual information and uses a maximum correlation minimum redundancy strategy for greedy selection. The approach uses copula entropy as a measure of feature relevance that captures the full-order interaction gain between features. Moreover, we prove the divisibility of multivariate mutual information, and derive a novel feature criterion, and propose a feature selection approach based on copula entropy called CEFS. Meanwhile, to overcome the instability of the CEFS method on some datasets, we propose the improved method CEFS+ which based on the rank technique. Finally, we evaluate the effectiveness of CEFS and CEFS+ using three classifiers on five datasets. In 10 out of 15 scenarios, our approach obtains the highest classification accuracy, which is much higher than the other six commonly used FS methods. In particular, our approach performs better on high-dimensional genetic datasets.

Scientific ReportsVol. 15(1)
Taiyuan University of Technology (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 25%
Gene expression and cancer classification
0.81
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An efficient and interactive feature selection approach based on copula entropy for high-dimensional genetic data — Yun Dang, Dongxi Li, et al. · Scientific Reports (2025) | TGRS Research Map | TGRS