Mechanistic insights into the recognition of Fe2+ and solvent-driven selectivity of chalcone-based receptors

Building on recent works [Spectrochim. Acta A: Mol. Biomol. Spectrosc. 287 (2023) 122107; 303 (2023) 123129], this study offers novel insight into the supramolecular recognition of Fe 2+ by receptor R1, wherein the conventional chalcone binding strategy is extended. Density Functional Theory (DFT) is used to differentiate the complexation behavior of chalcone-based receptors (R1, R2, R3), revealing key nucleophilic centres—particularly the carbonyl and phenolic oxygen atoms—as primary coordination sites. Optimized geometries, semi-empirical tight-binding calculations, and molecular dynamics simulations highlight the crucial role of the carbonyl oxygen of R1 and demonstrate that solvent molecules actively participate in metal coordination. This leads to the proposal of a new complexation model for R1, where solvent molecules facilitate stable 1:1 host–guest complex formation. The role of non-covalent interactions (NCIs), including ion–dipole, hydrogen bonding, and van der Waals forces, is also emphasized in governing metal ion (Fe 2+ , Ni 2+ , Cu 2+ ) recognition and selectivity. Quantum mechanical electron density (ED) and reduced density gradient (RDG) analyses visualize and quantify these weak interactions, showing that Fe 2+ forms the most stable complex due to favorable coordination, unlike Ni 2+ and Cu 2+ . These theoretical predictions align with experimental results—such as pH effects, UV–Vis spectroscopy, and NMR titrations—supporting the hypothesis that solvent molecules act as auxiliary ligands. Together, these findings deepen the understanding of chalcone-based receptor design and their metal ion sensing capabilities in mixed solvent environments. • The solvent mixture plays an important role in binding of metal ions by chalcones where keto- and phenolic-groups are distant in the moleculer structure. • The non-covalent interactions dominate over other interactions in the supramolecular recognition. • The applicability of independent gradient model for non-covalent interactions in the metal-chalcone complexation has been explored.

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Publication Details

Journal
Results in Chemistry
Published
2025-08-18
DOI
https://doi.org/10.1016/j.rechem.2025.102621
Citations
3
Primary Topic
Molecular Sensors and Ion Detection
Type
article
Field-Weighted Citation Impact
2.27

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article

Mechanistic insights into the recognition of Fe2+ and solvent-driven selectivity of chalcone-based receptors

Ajay Shankar
3 citations
Results in Chemistry
Molecular Sensors and Ion Detection
2.27
article

Mechanistic insights into the recognition of Fe2+ and solvent-driven selectivity of chalcone-based receptors

Ajay Shankar
article en
3 citations

Abstract

Building on recent works [Spectrochim. Acta A: Mol. Biomol. Spectrosc. 287 (2023) 122107; 303 (2023) 123129], this study offers novel insight into the supramolecular recognition of Fe 2+ by receptor R1, wherein the conventional chalcone binding strategy is extended. Density Functional Theory (DFT) is used to differentiate the complexation behavior of chalcone-based receptors (R1, R2, R3), revealing key nucleophilic centres—particularly the carbonyl and phenolic oxygen atoms—as primary coordination sites. Optimized geometries, semi-empirical tight-binding calculations, and molecular dynamics simulations highlight the crucial role of the carbonyl oxygen of R1 and demonstrate that solvent molecules actively participate in metal coordination. This leads to the proposal of a new complexation model for R1, where solvent molecules facilitate stable 1:1 host–guest complex formation. The role of non-covalent interactions (NCIs), including ion–dipole, hydrogen bonding, and van der Waals forces, is also emphasized in governing metal ion (Fe 2+ , Ni 2+ , Cu 2+ ) recognition and selectivity. Quantum mechanical electron density (ED) and reduced density gradient (RDG) analyses visualize and quantify these weak interactions, showing that Fe 2+ forms the most stable complex due to favorable coordination, unlike Ni 2+ and Cu 2+ . These theoretical predictions align with experimental results—such as pH effects, UV–Vis spectroscopy, and NMR titrations—supporting the hypothesis that solvent molecules act as auxiliary ligands. Together, these findings deepen the understanding of chalcone-based receptor design and their metal ion sensing capabilities in mixed solvent environments. • The solvent mixture plays an important role in binding of metal ions by chalcones where keto- and phenolic-groups are distant in the moleculer structure. • The non-covalent interactions dominate over other interactions in the supramolecular recognition. • The applicability of independent gradient model for non-covalent interactions in the metal-chalcone complexation has been explored.

Results in ChemistryVol. 17
Indira Gandhi National Tribal University (IN)
University Grants Commission, Inter-University Accelerator Centre
Openalex Percentile: Top 11%
Molecular Sensors and Ion Detection
2.27
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