Hierarchical Contrastive Learning for Precise Whole-Body Anatomical Localization in PET/CT Imaging

Automatic anatomical localization is critical for radiology report generation. While many studies focus on lesion detection and segmentation, anatomical localization-accurately describing lesion positions in radiology reports-has received less attention. Conventional segmentation-based methods are limited to organ-level localization and often fail in severe disease cases due to low segmentation accuracy. To address these limitations, we reformulate anatomical localization as an image-to-text retrieval task. Specifically, we propose a CLIP-based framework that aligns lesion image patches with anatomically descriptive text embeddings in a shared multimodal space. By projecting lesion features into the semantic space and retrieving the most relevant anatomical descriptions in a coarse-to-fine manner, our method achieves fine-grained lesion localization with high accuracy across the entire body. Our main contributions are as follows: (1) hierarchical anatomical retrieval, which organizes 387 locations into a two-level hierarchy, by retrieving from the first level of 124 coarse categories to narrow down the search space and reduce localization complexity; (2) augmented location descriptions, which integrate domain-specific anatomical knowledge for enhancing semantic representation and improving visual-text alignment; and (3) semi-hard negative sample mining, which improves training stability and discriminative learning by avoiding selecting the overly similar negative samples that may introduce label noise or semantic ambiguity. We validate our method on two whole-body PET/CT datasets, achieving an 84.13% localization accuracy on the internal test set and 80.42% on the external test set, with a per-lesion inference time of 34 ms. The proposed framework also demonstrated superior robustness in complex clinical cases compared to segmentation-based approaches.

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Publication Details

Journal
IEEE Transactions on Medical Imaging
Published
2025-08-18
DOI
https://doi.org/10.1109/tmi.2025.3599197
Primary Topic
Medical Imaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Hierarchical Contrastive Learning for Precise Whole-Body Anatomical Localization in PET/CT Imaging

Dinggang G. Shen, J. Y. Liu, Sen Zhong, Yaozong Gao et al.
1 links
IEEE Transactions on Medical Imaging
Medical Imaging Techniques and Applications
article

Hierarchical Contrastive Learning for Precise Whole-Body Anatomical Localization in PET/CT Imaging

Dinggang G. Shen, J. Y. Liu, Sen Zhong, Yaozong Gao, Yiran Shu, Yanbo Chen, Xinlu Wang, Xiang Sean Zhou, Mingyang Yu, Weifang Zhang, Yiqiang Zhan, Meixin Zhao
article en

Abstract

Automatic anatomical localization is critical for radiology report generation. While many studies focus on lesion detection and segmentation, anatomical localization-accurately describing lesion positions in radiology reports-has received less attention. Conventional segmentation-based methods are limited to organ-level localization and often fail in severe disease cases due to low segmentation accuracy. To address these limitations, we reformulate anatomical localization as an image-to-text retrieval task. Specifically, we propose a CLIP-based framework that aligns lesion image patches with anatomically descriptive text embeddings in a shared multimodal space. By projecting lesion features into the semantic space and retrieving the most relevant anatomical descriptions in a coarse-to-fine manner, our method achieves fine-grained lesion localization with high accuracy across the entire body. Our main contributions are as follows: (1) hierarchical anatomical retrieval, which organizes 387 locations into a two-level hierarchy, by retrieving from the first level of 124 coarse categories to narrow down the search space and reduce localization complexity; (2) augmented location descriptions, which integrate domain-specific anatomical knowledge for enhancing semantic representation and improving visual-text alignment; and (3) semi-hard negative sample mining, which improves training stability and discriminative learning by avoiding selecting the overly similar negative samples that may introduce label noise or semantic ambiguity. We validate our method on two whole-body PET/CT datasets, achieving an 84.13% localization accuracy on the internal test set and 80.42% on the external test set, with a per-lesion inference time of 34 ms. The proposed framework also demonstrated superior robustness in complex clinical cases compared to segmentation-based approaches.

IEEE Transactions on Medical ImagingVol. 45(1)
Peking University (CN), ShanghaiTech University (CN), First Affiliated Hospital of Guangzhou Medical University (CN), United Imaging Healthcare (China) (CN), Peking University Third Hospital (CN), Beijing Haidian Hospital (CN), Guangzhou Medical University (CN)
National Natural Science Foundation of China
Quality Education
Openalex Percentile: Top 70%
Medical Imaging Techniques and Applications
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