Phytochemical Profiling and In Silico Evaluation of Phenolic Compounds From <i>Asphodelus ramosus</i> L.: Antioxidant Activity, Molecular Docking, Dynamics, and ADMET Insights

In this study, phenolic extracts from the aerial parts of Asphodelus ramosus L. were evaluated. Chemical composition analysis using LC-MS/MS revealed chlorogenic acid as the primary component in all extracts, with concentrations of 1970.370, 284.951, and 33 078.623 µg/g in the methylene dichloride (ArMDE), ethyl acetate (ArEAE), and n-butanol (ArBE) extracts, respectively. The total phenolic content (TPC) was highest in ArBE, followed closely by ArEAE, whereas ArMDE exhibited the lowest TPC. Similarly, the total flavonoid content (TFC) followed the same trend, with ArBE containing the highest level, followed by ArEAE and then ArMDE. The antioxidant activity was assessed in vitro using six different methods. Notably, in the DPPH<sup>•</sup> scavenging assay and the phenanthroline method, ArEAE exhibited the highest inhibitory activity. Conversely, ArMDE demonstrated the greatest activity in the ABTS<sup>•+</sup> assay but was the least active in the DPPH<sup>•</sup>, galvinoxyl radical (GOR), cupric reducing antioxidant capacity (CUPRAC), ferric reducing antioxidant power (FRAP), and phenanthroline assays. In the GOR and CUPRAC assays, ArBE showed the highest activity. These results were compared to antioxidant standards, namely, BHA, BHT, α-tocopherol, ascorbic acid, and Trolox. In the FRAP assay, ArBE exhibited a value of A0.50 at 14.77 ± 0.28 µg/mL, surpassing the standard α-tocopherol, which had an A0.50 of 34.93 ± 2.38 µg/mL. Computational studies were conducted to describe the structure-activity relationship, employing molecular docking to explore the interactions of the identified compounds with the active site. Additionally, molecular dynamics (MD) simulations were used to assess the stability of the derivatives upon interaction with the active site. Finally, ADMET prediction analysis was employed to evaluate the clinical viability of the identified compounds, confirming that they exhibit favorable drug-likeness properties.

Authors

Institutions

Publication Details

Journal
Chemistry & Biodiversity
Published
2025-08-18
DOI
https://doi.org/10.1002/cbdv.202501469
Primary Topic
Free Radicals and Antioxidants
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Phytochemical Profiling and In Silico Evaluation of Phenolic Compounds From Asphodelus ramosus L.: Antioxidant Activity, Molecular Docking, Dynamics, and ADMET Insights

Sabrina Bouguessa, Ayoub Nadji, Hatem Beddiar, Elmas Öktem Olgun et al.
Chemistry & Biodiversity
Free Radicals and Antioxidants
article

Phytochemical Profiling and In Silico Evaluation of Phenolic Compounds From Asphodelus ramosus L.: Antioxidant Activity, Molecular Docking, Dynamics, and ADMET Insights

Sabrina Bouguessa, Ayoub Nadji, Hatem Beddiar, Elmas Öktem Olgun, Hacéne K’tir, Narimane Saigaa, Mohammed Nacer, Wafia Boukhedena, Soraya Hioun, Latifa Khattabi, Abdelkrim Gouasmia
article en

Abstract

In this study, phenolic extracts from the aerial parts of Asphodelus ramosus L. were evaluated. Chemical composition analysis using LC-MS/MS revealed chlorogenic acid as the primary component in all extracts, with concentrations of 1970.370, 284.951, and 33 078.623 µg/g in the methylene dichloride (ArMDE), ethyl acetate (ArEAE), and n-butanol (ArBE) extracts, respectively. The total phenolic content (TPC) was highest in ArBE, followed closely by ArEAE, whereas ArMDE exhibited the lowest TPC. Similarly, the total flavonoid content (TFC) followed the same trend, with ArBE containing the highest level, followed by ArEAE and then ArMDE. The antioxidant activity was assessed in vitro using six different methods. Notably, in the DPPH<sup>•</sup> scavenging assay and the phenanthroline method, ArEAE exhibited the highest inhibitory activity. Conversely, ArMDE demonstrated the greatest activity in the ABTS<sup>•+</sup> assay but was the least active in the DPPH<sup>•</sup>, galvinoxyl radical (GOR), cupric reducing antioxidant capacity (CUPRAC), ferric reducing antioxidant power (FRAP), and phenanthroline assays. In the GOR and CUPRAC assays, ArBE showed the highest activity. These results were compared to antioxidant standards, namely, BHA, BHT, α-tocopherol, ascorbic acid, and Trolox. In the FRAP assay, ArBE exhibited a value of A0.50 at 14.77 ± 0.28 µg/mL, surpassing the standard α-tocopherol, which had an A0.50 of 34.93 ± 2.38 µg/mL. Computational studies were conducted to describe the structure-activity relationship, employing molecular docking to explore the interactions of the identified compounds with the active site. Additionally, molecular dynamics (MD) simulations were used to assess the stability of the derivatives upon interaction with the active site. Finally, ADMET prediction analysis was employed to evaluate the clinical viability of the identified compounds, confirming that they exhibit favorable drug-likeness properties.

Chemistry & BiodiversityVol. 22(12)
Badji Mokhtar-Annaba University (DZ), University Frères Mentouri Constantine 1 (DZ), Türkiye Bilimsel ve Teknolojik Araştırma Kurumu (TR), Biotechnology Research Center (IR), Université Larbi Tébessi (DZ), TÜBİTAK Marmara Research Center (TR), École Normale Supérieure de Constantine (DZ), Université Constantine 2 (DZ)
Openalex Percentile: Top 84%
Free Radicals and Antioxidants
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.