A chromosome-level genome assembly of Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae)

Sarcosaprophagous insects play a pivotal role in forensic entomology, particularly in estimation of the postmortem interval (PMI). Among them, Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae), demonstrates distinct ecological traits such as larviposition and the ability to colonize buried remains. Even so, it has been hard to learn more about its molecular biology since a high-quality genome assembly is missing. This research uses PacBio HiFi, Illumina and Hi-C methods to produce a chromosome-level genome assembly for S. princeps. The resulting genome spans 628.56 Mb, with a scaffold N50 of 118.89 Mb, and 99.87% of the assembled sequence (627.74 Mb) successfully anchored to seven chromosomes. BUSCO analysis indicates that the genome is 99.10% complete, with 94.4% of genes present in single copy and 4.7% duplicated. Annotation of the genome identified 14,348 protein-coding genes and found that repetitive sequences occupy 333.04 Mb of the genome. The availability of this high-resolution genomic resource will greatly improve future research on the evolution, habitats and genomics of the Sarcophagidae family.

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Journal
Scientific Data
Published
2025-08-15
DOI
https://doi.org/10.1038/s41597-025-05785-0
Primary Topic
Forensic Entomology and Diptera Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

A chromosome-level genome assembly of Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae)

Wenxuan Huang, Yingna Zhang, Yu Wang, Yinghui Wang et al.
Scientific Data
Forensic Entomology and Diptera Studies
article

A chromosome-level genome assembly of Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae)

Wenxuan Huang, Yingna Zhang, Yu Wang, Yinghui Wang, Shujin Li, Liangliang Li
article en

Abstract

Sarcosaprophagous insects play a pivotal role in forensic entomology, particularly in estimation of the postmortem interval (PMI). Among them, Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae), demonstrates distinct ecological traits such as larviposition and the ability to colonize buried remains. Even so, it has been hard to learn more about its molecular biology since a high-quality genome assembly is missing. This research uses PacBio HiFi, Illumina and Hi-C methods to produce a chromosome-level genome assembly for S. princeps. The resulting genome spans 628.56 Mb, with a scaffold N50 of 118.89 Mb, and 99.87% of the assembled sequence (627.74 Mb) successfully anchored to seven chromosomes. BUSCO analysis indicates that the genome is 99.10% complete, with 94.4% of genes present in single copy and 4.7% duplicated. Annotation of the genome identified 14,348 protein-coding genes and found that repetitive sequences occupy 333.04 Mb of the genome. The availability of this high-resolution genomic resource will greatly improve future research on the evolution, habitats and genomics of the Sarcophagidae family.

Scientific DataVol. 12(1)
Shihezi University (CN), Soochow University (CN), Shandong University of Political Science and Law (CN), Hebei Science and Technology Department (CN)
National Natural Science Foundation of China, Major Research Plan
Openalex Percentile: Top 81%
Forensic Entomology and Diptera Studies
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