Development of molecular markers for different traits and its application: A review

Crop breeding has been completely transformed by the creation of molecular markers, which make it possible to precisely identify genetic diversity and increase the effectiveness of trait selection. From first-generation RFLPs and RAPDs to more sophisticated systems like SSRs, SNPs, DArT, GBS, and KASP, this study outlines the development of marker technologies. The concepts, benefits, and drawbacks of each marker type are covered. The steps involved in developing a marker are described, including high-throughput genotyping, primer design, validation, and polymorphism area identification. The contributions of many applications, including genomic selection (GS), QTL mapping, genome-wide association studies (GWAS), genetic diversity analysis, and marker-assisted selection (MAS), to speeding up crop development are emphasized. Utilizing molecular markers in conjunction with genomic tools, machine learning, and genome editing has enormous potential for creating climate-resilient, high-performing crop varieties, despite ongoing obstacles such high costs, technical skills, and infrastructure requirements. Global food security and contemporary plant breeding continue to depend heavily on the ongoing development of marker technologies.

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Publication Details

Journal
International Journal of Advanced Biochemistry Research
Published
2025-08-01
DOI
https://doi.org/10.33545/26174693.2025.v9.i8e.5182
Primary Topic
Agricultural pest management studies
Type
article
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article

Development of molecular markers for different traits and its application: A review

Birjhu
International Journal of Advanced Biochemistry Research
Agricultural pest management studies
article

Development of molecular markers for different traits and its application: A review

Birjhu
article en

Abstract

Crop breeding has been completely transformed by the creation of molecular markers, which make it possible to precisely identify genetic diversity and increase the effectiveness of trait selection. From first-generation RFLPs and RAPDs to more sophisticated systems like SSRs, SNPs, DArT, GBS, and KASP, this study outlines the development of marker technologies. The concepts, benefits, and drawbacks of each marker type are covered. The steps involved in developing a marker are described, including high-throughput genotyping, primer design, validation, and polymorphism area identification. The contributions of many applications, including genomic selection (GS), QTL mapping, genome-wide association studies (GWAS), genetic diversity analysis, and marker-assisted selection (MAS), to speeding up crop development are emphasized. Utilizing molecular markers in conjunction with genomic tools, machine learning, and genome editing has enormous potential for creating climate-resilient, high-performing crop varieties, despite ongoing obstacles such high costs, technical skills, and infrastructure requirements. Global food security and contemporary plant breeding continue to depend heavily on the ongoing development of marker technologies.

International Journal of Advanced Biochemistry ResearchVol. 9(8)
Zero hunger
Openalex Percentile: Top 85%
Agricultural pest management studies
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Development of molecular markers for different traits and its application: A review — Birjhu · International Journal of Advanced Biochemistry Research (2025) | TGRS Research Map | TGRS