Image‐Based Individual Fish Identification as a Substitute for Invasive Methods: State‐of‐the‐Art and Research Gaps

ABSTRACT Individual identification of fish within the same species is one of the most crucial and frequently performed tasks in aquaculture research, and it is also widely used in aquaculture production. Fish sampling, treating, welfare, and disease state estimation are increasingly turning from group‐based to individualized. Traditionally, fish individual identification has relied on marking methods such as PIT tagging, which are invasive, time‐consuming, and labor‐intensive. It is also very constrained in large cultivation units such as cages. Consequently, there is a demand for developing non‐invasive techniques that are rapid and cost‐effective. Image‐based individual identification has the potential for developing remote, faster, and more economical methods for in situ identification of individual fish. This article reviews the development of these image‐based methods for fish individual identification over the past decades, presenting their fundamental concepts and principles. It analyses the strengths and weaknesses of each approach and outlines future research directions. Recent studies indicate that the application of convolutional neural networks holds great promise in accelerating the development of new techniques for more effective fish identification. However, the accuracy, large amount of training data, and specific experimental conditions of these methods still need improvement to meet the demands of intensive aquaculture. Through close collaboration between fisheries experts and engineers, the precision and level of intelligence in fish individual identification techniques will be further enhanced based on the aforementioned methods.

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Publication Details

Journal
Reviews in Aquaculture
Published
2025-08-10
DOI
https://doi.org/10.1111/raq.70078
Citations
1
Primary Topic
Water Quality Monitoring Technologies
Type
article
Field-Weighted Citation Impact
0.82

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article

Image‐Based Individual Fish Identification as a Substitute for Invasive Methods: State‐of‐the‐Art and Research Gaps

Jan Urban, Petr Císař, Mohammad Mehdi Ziaei
1 citations
Reviews in Aquaculture
Water Quality Monitoring Technologies
0.82
article

Image‐Based Individual Fish Identification as a Substitute for Invasive Methods: State‐of‐the‐Art and Research Gaps

Jan Urban, Petr Císař, Mohammad Mehdi Ziaei
article en
1 citations

Abstract

ABSTRACT Individual identification of fish within the same species is one of the most crucial and frequently performed tasks in aquaculture research, and it is also widely used in aquaculture production. Fish sampling, treating, welfare, and disease state estimation are increasingly turning from group‐based to individualized. Traditionally, fish individual identification has relied on marking methods such as PIT tagging, which are invasive, time‐consuming, and labor‐intensive. It is also very constrained in large cultivation units such as cages. Consequently, there is a demand for developing non‐invasive techniques that are rapid and cost‐effective. Image‐based individual identification has the potential for developing remote, faster, and more economical methods for in situ identification of individual fish. This article reviews the development of these image‐based methods for fish individual identification over the past decades, presenting their fundamental concepts and principles. It analyses the strengths and weaknesses of each approach and outlines future research directions. Recent studies indicate that the application of convolutional neural networks holds great promise in accelerating the development of new techniques for more effective fish identification. However, the accuracy, large amount of training data, and specific experimental conditions of these methods still need improvement to meet the demands of intensive aquaculture. Through close collaboration between fisheries experts and engineers, the precision and level of intelligence in fish individual identification techniques will be further enhanced based on the aforementioned methods.

Reviews in AquacultureVol. 17(4)
University of South Bohemia in České Budějovice (CZ)
Ministerstvo Školství, Mládeže a Tělovýchovy
Openalex Percentile: Top 24%
Water Quality Monitoring Technologies
0.82
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Image‐Based Individual Fish Identification as a Substitute for Invasive Methods: State‐of‐the‐Art and Research Gaps — Jan Urban, Petr Císař, et al. · Reviews in Aquaculture (2025) | TGRS Research Map | TGRS