Automated high-throughput RT-PCR v2

This protocol provides an outline for planning, setting up, and running an epMotion® M5073 for high-throughput RT-PCR. This protocol leverages a set of pre-written template programs to accommodate different numbers of gene expression targets. The template programs have been designed to dispense 2 μL of diluted RNA and 8 μL of one-step master mix (including primers and probes) to create 10 μL reactions on a 384-well PCR plate. Diluted RNA is to be arranged in a 96-well PCR plate for efficiency. We also provide the steps necessary to create custom RT-PCR runs for more advanced users. These steps also detail the settings used in our predefined programs. Users can expect consistent results with minimal variability between technical replicates that are quick and reliable.

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Publication Details

Published
2025-02-12
DOI
https://doi.org/10.17504/protocols.io.bp2l6dzm1vqe/v2
Primary Topic
Molecular Biology Techniques and Applications
Type
article
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article

Automated high-throughput RT-PCR v2

Alex Veith, Anna L. Shen, Christopher Bradfield
Molecular Biology Techniques and Applications
article

Automated high-throughput RT-PCR v2

Alex Veith, Anna L. Shen, Christopher Bradfield
article en

Abstract

This protocol provides an outline for planning, setting up, and running an epMotion® M5073 for high-throughput RT-PCR. This protocol leverages a set of pre-written template programs to accommodate different numbers of gene expression targets. The template programs have been designed to dispense 2 μL of diluted RNA and 8 μL of one-step master mix (including primers and probes) to create 10 μL reactions on a 384-well PCR plate. Diluted RNA is to be arranged in a 96-well PCR plate for efficiency. We also provide the steps necessary to create custom RT-PCR runs for more advanced users. These steps also detail the settings used in our predefined programs. Users can expect consistent results with minimal variability between technical replicates that are quick and reliable.

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Molecular Biology Techniques and Applications
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